# Load needed libraries

library(raster)
## Loading required package: sp
library(dplyr)
## 
## Attaching package: 'dplyr'
## The following objects are masked from 'package:raster':
## 
##     intersect, select, union
## The following objects are masked from 'package:stats':
## 
##     filter, lag
## The following objects are masked from 'package:base':
## 
##     intersect, setdiff, setequal, union
library(ggplot2)
library(tidyr)
## 
## Attaching package: 'tidyr'
## The following object is masked from 'package:raster':
## 
##     extract
library(vegan)
## Loading required package: permute
## Loading required package: lattice
## This is vegan 2.5-3
### Load Zonation outputs and proxies of gen div

# Path to rasters
myrasters<-c("../data/spatial/Zonation_output/00_MDP_PDG_caz.rank.compressed.tif", # Zonation output proxis div gen + species (n=221)
             "../data/spatial/Zonation_output/03_caz.rank.compressed.tif", # Zonation output Zonas Vida + species
             "../data/spatial/Zonation_output/00_MDP_caz.rank.compressed.tif", # Zonation output with species only (n=119)
             "../data/spatial/Zonation_output/01.rank.compressed.tif", # Zonation output species vs proxies (n=12240)
             "../data/spatial/Zonation_output/00_MDP_ADMU.ADMU.redistributed.rank.compressed.tif", # Zonation output with species, incorporating proxies as "administrative units" (n=119)
             "../data/spatial/areasProxyDivGen/PDG.tif") #Proxies div gen



# Stack rasters and add nicer names 
CWR<-stack(myrasters)
names(CWR)<-c("ZonationProxiDG", "ZonationZV", "ZonationSPP", "ZonationProxiDGvsSPP", "ZonationSPP_ADMU", "ProxiesDivGen")

#### Data description #####

ZT=0.10 #Zonation threshold

### plots
#colors for proxies div gen 
mycols<-c("grey", "#668325", "#9343c1", "#61b928", "#bc6cec", "#56cd5e", "#4667e6", "#bab71b", "#704dc1", "#b5cb3e", "#4c4fb8", "#83b124", "#5e7ef2", "#38a435", "#cc3ca6", "#3fcb85", "#ec49a6", "#86ca62", "#e471de", "#5d9d38", "#9b76e8", "#9ea122", "#a13ca0", "#3da35c", "#e53283", "#2b7c2c", "#b063c4", "#c7bb43", "#3b65c1", "#e2b438", "#628ceb", "#e69128", "#509be7", "#e0422f", "#34c7dd", "#c62a33", "#57d2b9", "#d1204a", "#57c597", "#ef3d76", "#56cdc9", "#ec4b5f", "#2ba198", "#e2672a", "#2baad3", "#b33f1d", "#6bbff0", "#ae6314", "#7f68c4", "#90ac42", "#774598", "#c0bd59", "#b58be8", "#4e6313", "#dd80d3", "#87be71", "#b62a7c", "#3b9065", "#c22a60", "#71b588", "#e75687", "#326a38", "#e46aad", "#628848", "#ad498c", "#b2c06d", "#535a99", "#c89d3c", "#3176ae", "#e97150", "#549bce", "#ca783f", "#7b7ec0", "#927b1f", "#a6a5e8", "#9a9c49", "#a161a4", "#a6b174", "#7d4f8c", "#e99b5c", "#206e54", "#b1394e", "#505e25", "#dc9ce0", "#786e30", "#ba7eb8", "#90652d", "#de93ba", "#caa569", "#9b3a66", "#e99d7a", "#8c4e6c", "#914c27", "#f288aa", "#b7443b", "#c6648b", "#bc7257", "#dd6e81", "#a7514b", "#e49190", "#a04f59", "#e6736d")


plot(CWR$ProxiesDivGen, main= "Areas Proxi of Genetic Diversity", col=mycols, legend=FALSE)

plot(CWR$ZonationSPP>=(1-ZT), legend=FALSE, main= "Zonation output Spp models")

plot(CWR$ZonationZV>=(1-ZT), legend=FALSE, main= "Zonation output Life Zones")

plot(CWR$ZonationProxiDG>=(1-ZT), legend=FALSE, main= "Zonation output Proxies Genetic Diversity")

plot(CWR$ZonationProxiDGvsSPP>=(1-ZT), legend=FALSE, main= "Zonation output Proxies Genetic Diversity vs spp")

plot(CWR$ZonationSPP_ADMU>=(1-ZT), legend=FALSE, main= "Zonation output Spp models, Proxies as ADMU")

### Describe proxies div gen
table(getValues(CWR$ProxiesDivGen))
## 
##      1      2      3      4      5      6      7      8      9     10 
##  69075   5508 122376  11448  77525  14616  16525  23248   3783  39718 
##     11     12     13     14     15     16     17     18     19     20 
##   6131  17327   4160   3445   8525    550  28560  10528  20488   4717 
##     21     22     23     24     25     26     27     28     29     30 
##   7153   8472  17042   6067  10256   3075    435   2897   1108    505 
##     31     32     33     34     35     36     37     38     39     40 
##     66  24703  38759  29076  97427  15930  35384   6368   3796  22680 
##     41     42     43     44     45     46     47     48     49     50 
##  12408   8496  16262  30487  15314  38427  17689  13662  11341   1245 
##     51     52     53     54     55     56     57     58     59     60 
##  28125  21130  29801    629   5515  11856  29465   1700   7397   2440 
##     61     62     63     64     65     66     67     68     69     70 
##     20    471    102     76    138    389   1229  22876 184304 103988 
##     71     72     73     74     75     76     77     78     79     80 
##   2746  39733  47451  38990  46992  49711  67153  11564   1924  50236 
##     81     82     83     84     85     86     87     88     89     90 
##  61648 185521  10552   6964    174 108081  12927  63816    231   7696 
##     91     92     93     94     95     96     97     98     99    100 
##   7876  20341  37323    698   1084   1783   1123  15275   6259   1097 
##    101    102 
##   2558    726
##### Analyses per sp #####

# Create where to store results for all spp
sol_tidy_spp<-character(0) # area of proxies of div gen for each zonation solution
sol_prop_spp<-character(0) # proportion of proxi of div gen for each zolnation solution in relation to its area in the sp distribution
sols_summary_spp<-character(0) # diversity indexes and mean of proportion 

# Remember zonation threshold used:
ZT
## [1] 0.1
# List of spp

spp<-list.files("../data/spatial/modelos_darwin_all/")
spp
##   [1] "Capsicum_annuum_glabriusculum.tif"      
##   [2] "Capsicum_frutescens.tif"                
##   [3] "Capsicum_lanceolatum.tif"               
##   [4] "Capsicum_rhomboideum.tif"               
##   [5] "Cucurbita_argyrosperma_var_sororia.tif" 
##   [6] "Cucurbita_cordata.tif"                  
##   [7] "Cucurbita_digitata.tif"                 
##   [8] "Cucurbita_foetidissima.tif"             
##   [9] "Cucurbita_lundelliana.tif"              
##  [10] "Cucurbita_okeechobeensis_martinezii.tif"
##  [11] "Cucurbita_palmata.tif"                  
##  [12] "Cucurbita_pedatifolia.tif"              
##  [13] "Cucurbita_pepo_fraterna.tif"            
##  [14] "Cucurbita_radicans.tif"                 
##  [15] "Gossypium_aridum.tif"                   
##  [16] "Gossypium_davidsonii.tif"               
##  [17] "Gossypium_gossypioides.tif"             
##  [18] "Gossypium_harknesii.tif"                
##  [19] "Gossypium_hirsutum.tif"                 
##  [20] "Gossypium_thurberi.tif"                 
##  [21] "Persea_albida.tif"                      
##  [22] "Persea_americana.tif"                   
##  [23] "Persea_caerulea.tif"                    
##  [24] "Persea_donnell_smithii.tif"             
##  [25] "Persea_hintonii.tif"                    
##  [26] "Persea_liebmannii.tif"                  
##  [27] "Persea_longipes.tif"                    
##  [28] "Persea_pallescens.tif"                  
##  [29] "Persea_podadenia.tif"                   
##  [30] "Persea_purpusii.tif"                    
##  [31] "Persea_schiedeana.tif"                  
##  [32] "Persea_vesticula.tif"                   
##  [33] "Phaseolus_acutifolius_acutifolius.tif"  
##  [34] "Phaseolus_acutifolius_tenuifolius.tif"  
##  [35] "Phaseolus_angustissimus.tif"            
##  [36] "Phaseolus_chiapasanus.tif"              
##  [37] "Phaseolus_coccineus.tif"                
##  [38] "Phaseolus_filiformis.tif"               
##  [39] "Phaseolus_glabellus.tif"                
##  [40] "Phaseolus_jaliscanus.tif"               
##  [41] "Phaseolus_leptostachyus.tif"            
##  [42] "Phaseolus_lunatus_silvester.tif"        
##  [43] "Phaseolus_maculatus.tif"                
##  [44] "Phaseolus_micranthus.tif"               
##  [45] "Phaseolus_microcarpus.tif"              
##  [46] "Phaseolus_parvifolius.tif"              
##  [47] "Phaseolus_parvulus.tif"                 
##  [48] "Phaseolus_pauciflorus.tif"              
##  [49] "Phaseolus_pedicellatus.tif"             
##  [50] "Phaseolus_perplexus.tif"                
##  [51] "Phaseolus_pluriflorus.tif"              
##  [52] "Phaseolus_ritensis.tif"                 
##  [53] "Phaseolus_scabrellus.tif"               
##  [54] "Phaseolus_vulgarisl.tif"                
##  [55] "Physalis_acutifolia.tif"                
##  [56] "Physalis_angulata.tif"                  
##  [57] "Physalis_angustiphysa.tif"              
##  [58] "Physalis_campechiana.tif"               
##  [59] "Physalis_caudella.tif"                  
##  [60] "Physalis_chenopodifolia.tif"            
##  [61] "Physalis_cinerascens.tif"               
##  [62] "Physalis_cordata.tif"                   
##  [63] "Physalis_coztomatl.tif"                 
##  [64] "Physalis_crassifolia.tif"               
##  [65] "Physalis_glutinosa.tif"                 
##  [66] "Physalis_gracilis.tif"                  
##  [67] "Physalis_hederifolia.tif"               
##  [68] "Physalis_heterophylla.tif"              
##  [69] "Physalis_ignota.tif"                    
##  [70] "Physalis_ixocarpa.tif"                  
##  [71] "Physalis_lagascae.tif"                  
##  [72] "Physalis_leptophylla.tif"               
##  [73] "Physalis_melanocystis.tif"              
##  [74] "Physalis_minuta.tif"                    
##  [75] "Physalis_nicandroides.tif"              
##  [76] "Physalis_orizabae.tif"                  
##  [77] "Physalis_patula.tif"                    
##  [78] "Physalis_philadelphica.tif"             
##  [79] "Physalis_pruinosa.tif"                  
##  [80] "Physalis_pubescens.tif"                 
##  [81] "Physalis_solanaceus.tif"                
##  [82] "Physalis_sordida.tif"                   
##  [83] "Physalis_sulphurea.tif"                 
##  [84] "Physalis_virginiana.tif"                
##  [85] "Physalis_volubilis.tif"                 
##  [86] "Physalis_waterfallii.tif"               
##  [87] "Solanum_agrimonifolium.tif"             
##  [88] "Solanum_bulbocastanum.tif"              
##  [89] "Solanum_cardiophyllum.tif"              
##  [90] "Solanum_clarum.tif"                     
##  [91] "Solanum_demissum.tif"                   
##  [92] "Solanum_ehrenbergii.tif"                
##  [93] "Solanum_endiense.tif"                   
##  [94] "Solanum_hjertingii.tif"                 
##  [95] "Solanum_hougasii.tif"                   
##  [96] "Solanum_iopetalum.tif"                  
##  [97] "Solanum_morelliforme.tif"               
##  [98] "Solanum_oxycarpum.tif"                  
##  [99] "Solanum_pinnatisectum.tif"              
## [100] "Solanum_polyadenium.tif"                
## [101] "Solanum_schenckii.tif"                  
## [102] "Solanum_stenophyllidium.tif"            
## [103] "Solanum_stoloniferum.tif"               
## [104] "Solanum_trifidum.tif"                   
## [105] "Solanum_verrucosum.tif"                 
## [106] "Tripsacum_lanceolatum.tif"              
## [107] "Tripsacum_latifolium.tif"               
## [108] "Tripsacum_pilosum.tif"                  
## [109] "Vanilla_odorata.tif"                    
## [110] "Vanilla_pompona.tif"                    
## [111] "Zea_diploperennis.tif"                  
## [112] "Zea_luxurians.tif"                      
## [113] "Zea_mays_huehuetenango.tif"             
## [114] "Zea_mays_mexicana_race_chalco.tif"      
## [115] "Zea_mays_mexicana_race_durango.tif"     
## [116] "Zea_mays_mexicana_race_mesa_central.tif"
## [117] "Zea_mays_mexicana_race_nobogame.tif"    
## [118] "Zea_mays_parviglumis.tif"               
## [119] "Zea_perennis.tif"
for (i in 1:length(spp)){ 

spname<-gsub(".tif", "", spp[i])
spname<-gsub("_", " ", spname)
print(spname)
  
# add to stacks of raster the raster with the sp distribution model

CWR_sp<-stack(CWR, paste0("../data/spatial/modelos_darwin_all/", spp[i])) #  sp model
names(CWR_sp)[7]<-"ENM_sp"

# plot
plot(CWR_sp$ENM_sp, legend=FALSE, main= paste(spname, "distribution"))

# Define areas with Proxies of DivGen for that sp
# this works because the ENM_sp is coded 1= sp presence 0= absence
sp_ProxiesDivGen<- CWR_sp$ProxiesDivGen * CWR_sp$ENM_sp

# write to raster
writeRaster(sp_ProxiesDivGen, format= "GTiff", file= paste0("../data/spatial/areasProxyDivGen/crop_to_sp/", "PDG_", spp[i]), overwrite=TRUE)

############## Quantify overlaps

### convert to rasters to points to have a "df of overlaps"
CWR_overlaps<-as.data.frame(rasterToPoints(CWR_sp))

##### calcs for each solution

##### 1) Proxies of Div Gen in base ENM of sp
## subset
x<-dplyr::filter(CWR_overlaps, ENM_sp==1) %>% arrange(., ProxiesDivGen)
x$ProxiesDivGen<-as.character(x$ProxiesDivGen)

# save results in df
sol_base<-as.data.frame(table(x$ProxiesDivGen))
names(sol_base)<-c("ProxiDivGen", "ENM_sp")


### plots

## bar plot 
# ggplot(x, aes(ProxiesDivGen)) + geom_bar() + ggtitle(paste("Areas Proxi of Genetic Diversity for", spp[i]))


##### 2) CWRsp + Zonation spp models

### calcs
## subet
x<-dplyr::filter(CWR_overlaps, ENM_sp==1, ZonationSPP>=(1-ZT)) %>% arrange(., ProxiesDivGen)
x$ProxiesDivGen<-as.character(x$ProxiesDivGen)

# Save to common data frame
sol_ZSPP<-as.data.frame(table(x$ProxiesDivGen))
names(sol_ZSPP)<-c("ProxiDivGen", "ZonationSPP")

## bar plot 
# ggplot(x, aes(ProxiesDivGen)) + geom_bar() + ggtitle(paste(spname,"conserved under ZonationSPP at", ZT))


##### 3) CWRsp + Zonation Zonas de vida

### calcs
## subet
x<-dplyr::filter(CWR_overlaps, ENM_sp==1, ZonationZV>=(1-ZT)) %>% arrange(., ProxiesDivGen)
x$ProxiesDivGen<-as.character(x$ProxiesDivGen)


# Save to common data frame
sol_ZZV<-as.data.frame(table(x$ProxiesDivGen))
names(sol_ZZV)<-c("ProxiDivGen", "ZonationZV")


## bar plot 
# ggplot(x, aes(ProxiesDivGen)) + geom_bar() + ggtitle(paste(spname, "conserved under ZonationZV at", ZT))


##### 4) CWRsp + Zonation Zonas Proxies Div Gen

### calcs
## subet
x<-dplyr::filter(CWR_overlaps, ENM_sp==1, ZonationProxiDG>=(1-ZT)) %>% arrange(., ProxiesDivGen)
x$ProxiesDivGen<-as.character(x$ProxiesDivGen)

# Save to common data frame
sol_ZProxiDG<-as.data.frame(table(x$ProxiesDivGen))
names(sol_ZProxiDG)<-c("ProxiDivGen", "ZonationProxiDG")


## bar plot 
# ggplot(x, aes(ProxiesDivGen)) + geom_bar() + ggtitle(paste(spname, "conserved under ZonationProxiDivGen at", ZT))


##### 5) CWRsp + Zonation Zonas Proxies Div Gen vs SPP

### calcs
## subet
x<-dplyr::filter(CWR_overlaps, ENM_sp==1, ZonationProxiDGvsSPP>=(1-ZT)) %>% arrange(., ProxiesDivGen)
x$ProxiesDivGen<-as.character(x$ProxiesDivGen)


# Save to common data frame
sol_ZProxiDGvsSPP<-as.data.frame(table(x$ProxiesDivGen))
names(sol_ZProxiDGvsSPP)<-c("ProxiDivGen", "ZonationProxiDGvsSPP")


## bar plot 
#ggplot(x, aes(ProxiesDivGen)) + geom_bar() + ggtitle(paste(spname, "conserved under ZonationProxiDivGenvsSPP at", ZT))


##### 6) CWRsp + Zonation spp models + Proxies Div Gen as administrative units 

### calcs
## subet
x<-dplyr::filter(CWR_overlaps, ENM_sp==1, ZonationSPP_ADMU>=(1-ZT)) %>% arrange(., ProxiesDivGen)
x$ProxiesDivGen<-as.character(x$ProxiesDivGen)


# Save to common data frame
sol_ZSPP_ADMU<-as.data.frame(table(x$ProxiesDivGen))
names(sol_ZSPP_ADMU)<-c("ProxiDivGen", "ZonationSPP_ADMU")

## bar plot 
# ggplot(x, aes(ProxiesDivGen)) + geom_bar() + ggtitle(paste(spname, "conserved under ZonationSPP_ADMU at", ZT))




####### Analyse results together


### ALL
## Prepare data
# Join all solutions
sol_all<-left_join(sol_base, sol_ZSPP) %>% left_join(., sol_ZZV) %>% left_join(., sol_ZProxiDG) %>% left_join(., sol_ZProxiDGvsSPP) %>% left_join(., sol_ZSPP_ADMU) %>%
  mutate_all(funs(replace(., is.na(.), 0))) # NAs are actually 0s
head(sol_all)

# gather into tidy df
sol_tidy<-gather(sol_all, Solution, Freq, -ProxiDivGen)
head(sol_tidy)

## Plot
#print(ggplot(sol_tidy, aes(ProxiDivGen, Freq)) + geom_col(aes(fill=Solution)) + ggtitle(paste(spname, "at Zonation threshold", ZT)))

print(ggplot(sol_tidy, aes(x=ProxiDivGen, y= Freq, fill=Solution)) + geom_col(position="dodge") + ggtitle(paste(spname, "at Zonation threshold", ZT)))

#print(ggplot(sol_tidy, aes(x=ProxiDivGen, y= Freq, fill=Solution)) + geom_col(position="fill") + ggtitle(paste(spname, "at Zonation threshold", ZT)))


# save results with the rest of the spp
sol_tidy$sp<-spname
sol_tidy_spp<-rbind(sol_tidy_spp, sol_tidy)


## Estimate Proportion of Zones Proxies Div Gen under conservation for each Zonation solution

# estimate proportion
sol_prop<-mutate(sol_all,
                 ZonationSPP=ZonationSPP/ENM_sp, 
                 ZonationZV=ZonationZV/ENM_sp,
                 ZonationProxiDG=ZonationProxiDG/ENM_sp,
                 ZonationProxiDGvsSPP=ZonationProxiDGvsSPP/ENM_sp,
                 ZonationSPP_ADMU=ZonationSPP_ADMU/ENM_sp)
head(sol_prop)

# tidy
sol_prop<-gather(sol_prop, Solution, Proportion_ProxiDG, -ProxiDivGen, -ENM_sp)
tail(sol_prop)

    
# save results with the rest of the spp
sol_prop$sp<-spname
sol_prop<-as.data.frame(sol_prop)
sol_prop_spp<-rbind(sol_prop_spp, sol_prop)

## make summary of proportion and area

#prop
myprop<-group_by(sol_prop, Solution) %>% 
  summarise(., mean.prop = mean(Proportion_ProxiDG), median.prop=median(Proportion_ProxiDG))

#area
tot.area.sp<-sum(sol_all$ENM_sp)

myarea<-sol_tidy %>% 
  group_by(., Solution) %>% summarise(., Area=sum(Freq)) %>%
  mutate(., Prop_to_AreaSP=Area/tot.area.sp)

sol_prop_summary<-left_join(myarea, myprop, by="Solution")       
sol_prop_summary<-as.data.frame(sol_prop_summary)

### Estimate Simpson diversity index

## we need an abundance matrix with species (ProxisDivGen in this case) in columns
# and abundance by treatment (Zonation output in this case) in rows. Therefore:

# transpose data to produce abundace matrix as expected by vegan
row.names(sol_all)<-sol_all[,1]
abundance.matrix<-t(sol_all[, 2:7])
class(abundance.matrix)

### Estimate Diversity Indices

indices.div<-data.frame("Solution"=colnames(sol_all[2:7]))

# Richness
indices.div$Richness<-rowSums(abundance.matrix>0)

# Shannon
indices.div$shannon<-diversity(abundance.matrix, index="shannon") # shannon is default

# Simpson
indices.div$simpson<-diversity(abundance.matrix, index="simpson")


#### Distance among conserving the whole distribution of the sp ("optimun scenario possible") and Zonation solutions

sol_dist<-data.frame(Solution=c("ENM_sp", "ZonationSPP", "ZonationZV", "ZonationProxiDG" ,"ZonationProxiDGvsSPP" ,"ZonationSPP_ADMU"),
                     Dist.to.Optimun=c(as.vector(dist(rbind(sol_all$ENM_sp, sol_all$ENM_sp))),
                                       as.vector(dist(rbind(sol_all$ENM_sp, sol_all$ZonationSPP))),
                                       as.vector(dist(rbind(sol_all$ENM_sp,sol_all$ ZonationZV))),
                                       as.vector(dist(rbind(sol_all$ENM_sp, sol_all$ZonationProxiDG))),
                                       as.vector(dist(rbind(sol_all$ENM_sp, sol_all$ZonationProxiDGvsSPP))),
                                       as.vector(dist(rbind(sol_all$ENM_sp, sol_all$ZonationSPP_ADMU)))))


### join summary results together 

sols_summary<-left_join(indices.div, sol_prop_summary, "Solution") %>% left_join(., sol_dist, "Solution")
print(sols_summary)

###  save with the rest of the spp
sols_summary$sp<-spname
sols_summary_spp<-rbind(sols_summary_spp, sols_summary)

}
## [1] "Capsicum annuum glabriusculum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector
## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       64 3.216956 0.9341559 473887      1.0000000
## 2          ZonationSPP       57 3.183124 0.9426602  57246      0.1208010
## 3           ZonationZV       56 2.977902 0.9277750  61156      0.1290519
## 4      ZonationProxiDG       59 3.601769 0.9690824  70781      0.1493626
## 5 ZonationProxiDGvsSPP       64 3.771706 0.9735631  65715      0.1386723
## 6     ZonationSPP_ADMU       61 3.202893 0.9334670  51178      0.1079962
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2337136  0.10629199        113743.9
## 3 0.2528522  0.09174691        113795.0
## 4 0.3699246  0.20990318        113614.4
## 5 0.5070655  0.36755490        113899.3
## 6 0.1663593  0.10062029        108847.3
## [1] "Capsicum frutescens"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       61 3.083087 0.9296896 452533      1.0000000
## 2          ZonationSPP       56 3.140053 0.9442162  62403      0.1378971
## 3           ZonationZV       50 2.925797 0.9246275  68034      0.1503404
## 4      ZonationProxiDG       54 3.529299 0.9674442  68589      0.1515668
## 5 ZonationProxiDGvsSPP       61 3.667893 0.9697897  63784      0.1409488
## 6     ZonationSPP_ADMU       58 3.111712 0.9287240  48470      0.1071082
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3002681  0.14527931        111990.2
## 3 0.2995288  0.11247224        111554.3
## 4 0.4382082  0.25944987        112101.5
## 5 0.5632348  0.46447368        112189.2
## 6 0.2130706  0.09986421        107540.9
## [1] "Capsicum lanceolatum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       27 2.202424 0.8494695 36419      1.0000000
## 2          ZonationSPP       25 2.121480 0.8238560 21944      0.6025426
## 3           ZonationZV       24 2.080342 0.8284510 20080      0.5513606
## 4      ZonationProxiDG       25 2.443394 0.8869061 13397      0.3678574
## 5 ZonationProxiDGvsSPP       27 2.644247 0.9105875 13371      0.3671435
## 6     ZonationSPP_ADMU       26 2.209219 0.8428302  8391      0.2304017
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.6299071   0.6505469        6758.678
## 3 0.5975927   0.5861244        7429.823
## 4 0.6324779   0.6360656       10567.049
## 5 0.8188566   1.0000000       10641.585
## 6 0.3836902   0.2330407       11099.185
## [1] "Capsicum rhomboideum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       71 3.507281 0.9526507 447506      1.0000000
## 2          ZonationSPP       66 3.364989 0.9508785  69181      0.1545923
## 3           ZonationZV       63 3.287180 0.9510323  58357      0.1304050
## 4      ZonationProxiDG       65 3.784083 0.9741076  77054      0.1721854
## 5 ZonationProxiDGvsSPP       71 3.941199 0.9771656  86087      0.1923706
## 6     ZonationSPP_ADMU       70 3.428587 0.9428253  56747      0.1268072
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2526916   0.1375691        86368.56
## 3 0.2385075   0.1008996        88323.02
## 4 0.3832598   0.2558323        88709.74
## 5 0.4606457   0.3654661        87071.29
## 6 0.1790146   0.1202470        84722.05
## [1] "Cucurbita argyrosperma var sororia"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       60 3.363551 0.9567797 397607     1.00000000
## 2          ZonationSPP       52 3.028634 0.9310186  44352     0.11154733
## 3           ZonationZV       53 2.937308 0.9248322  38397     0.09657023
## 4      ZonationProxiDG       50 3.487563 0.9666728  68197     0.17151861
## 5 ZonationProxiDGvsSPP       60 3.644269 0.9704212  67742     0.17037426
## 6     ZonationSPP_ADMU       60 3.340618 0.9531648  34208     0.08603470
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1836882  0.07829714        75197.44
## 3 0.1922179  0.06554039        76447.04
## 4 0.2985120  0.14642710        73313.74
## 5 0.5371206  0.39055025        72918.20
## 6 0.2060649  0.10004308        75838.38
## [1] "Cucurbita cordata"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp        8 1.508563 0.7280235 105035     1.00000000
## 2          ZonationSPP        7 1.357728 0.6808541  14734     0.14027705
## 3           ZonationZV        8 1.434693 0.7285555  21446     0.20417956
## 4      ZonationProxiDG        8 1.705914 0.7918314   9505     0.09049364
## 5 ZonationProxiDGvsSPP        8 1.851607 0.8246003   5520     0.05255391
## 6     ZonationSPP_ADMU        8 1.425816 0.7226389  12204     0.11618984
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1491582  0.11232198        48717.07
## 3 0.3792826  0.25213003        44374.42
## 4 0.3175755  0.10484518        50602.31
## 5 0.2612351  0.07401138        52615.68
## 6 0.2182500  0.10381353        48925.90
## [1] "Cucurbita digitata"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       24 2.421651 0.8918358 327643     1.00000000
## 2          ZonationSPP       16 2.171328 0.8712642  23570     0.07193805
## 3           ZonationZV       20 2.365342 0.8769767  31931     0.09745668
## 4      ZonationProxiDG       20 2.529114 0.9091445  18404     0.05617089
## 5 ZonationProxiDGvsSPP       24 2.817986 0.9314281  15139     0.04620578
## 6     ZonationSPP_ADMU       22 2.277847 0.8714981  39089     0.11930363
##    mean.prop median.prop Dist.to.Optimun
## 1         NA          NA            0.00
## 2 0.09401804  0.04390416       100831.81
## 3 0.27571899  0.10448782        99610.51
## 4 0.25169908  0.06117580       103471.90
## 5 0.39574227  0.11463026       104307.77
## 6 0.20901878  0.12389150        94808.45
## [1] "Cucurbita foetidissima"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       57 2.668251 0.9049909 972303     1.00000000
## 2          ZonationSPP       52 2.909410 0.9331374  62707     0.06449327
## 3           ZonationZV       49 2.806474 0.9130177  49464     0.05087303
## 4      ZonationProxiDG       49 3.284497 0.9560283  41767     0.04295677
## 5 ZonationProxiDGvsSPP       57 3.441321 0.9577946  60182     0.06189634
## 6     ZonationSPP_ADMU       54 2.754738 0.9110102 102332     0.10524703
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2042825  0.13255814        289676.5
## 3 0.2686301  0.09617995        291283.7
## 4 0.3115660  0.07340882        293004.9
## 5 0.5615915  0.59909910        288914.8
## 6 0.2205062  0.10656168        269832.3
## [1] "Cucurbita lundelliana"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness   shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp        9 1.2588921 0.6558438 120654     1.00000000
## 2          ZonationSPP        6 1.3833072 0.7192405  11447     0.09487460
## 3           ZonationZV        6 0.5593527 0.3053042  11582     0.09599350
## 4      ZonationProxiDG        5 1.5934200 0.7940932  12593     0.10437283
## 5 ZonationProxiDGvsSPP        9 1.8402480 0.8164955   6565     0.05441179
## 6     ZonationSPP_ADMU        9 1.2214055 0.6107688  16864     0.13977158
##   mean.prop  median.prop Dist.to.Optimun
## 1        NA           NA            0.00
## 2 0.1610484 0.0356077391        66796.52
## 3 0.2686484 0.0008238202        66144.65
## 4 0.1726861 0.0478724332        66248.25
## 5 0.5062280 0.2965779468        68668.55
## 6 0.2301945 0.1667509901        60511.65
## [1] "Cucurbita okeechobeensis martinezii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       37 2.654612 0.8989125 92128      1.0000000
## 2          ZonationSPP       29 2.408378 0.8748481 23632      0.2565127
## 3           ZonationZV       28 2.359903 0.8837924 18633      0.2022512
## 4      ZonationProxiDG       26 2.582206 0.9033637 14213      0.1542745
## 5 ZonationProxiDGvsSPP       37 3.126115 0.9462084 21829      0.2369421
## 6     ZonationSPP_ADMU       36 2.657258 0.9061560 16639      0.1806074
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2751324  0.14921616        22947.43
## 3 0.3028139  0.07242668        25664.07
## 4 0.2815016  0.11772316        26791.62
## 5 0.6522905  0.72222222        24959.17
## 6 0.3038849  0.14612676        24640.06
## [1] "Cucurbita palmata"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       11 1.722995 0.7917891 95699     1.00000000
## 2          ZonationSPP        9 1.532829 0.7553680 11709     0.12235238
## 3           ZonationZV        8 1.353297 0.6773688 11727     0.12254047
## 4      ZonationProxiDG        9 1.689639 0.7889201  8059     0.08421196
## 5 ZonationProxiDGvsSPP       11 2.019555 0.8597888  6093     0.06366838
## 6     ZonationSPP_ADMU       11 1.597371 0.7572322 10143     0.10598857
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1906258  0.08912656        38575.45
## 3 0.2394406  0.07070982        39351.78
## 4 0.3066130  0.05279732        40762.81
## 5 0.3968000  0.16127278        41683.50
## 6 0.3135107  0.13511029        39780.21
## [1] "Cucurbita pedolia"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       41 2.325366 0.8451722 116454     1.00000000
## 2          ZonationSPP       35 2.383402 0.8642605  15924     0.13674069
## 3           ZonationZV       34 2.364658 0.8447372  11615     0.09973895
## 4      ZonationProxiDG       35 2.530731 0.8979664  15865     0.13623405
## 5 ZonationProxiDGvsSPP       41 3.082615 0.9418721  20735     0.17805314
## 6     ZonationSPP_ADMU       39 2.177198 0.8341130  16039     0.13772820
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2745555  0.13734298        41064.55
## 3 0.2842636  0.14033045        42402.51
## 4 0.3373780  0.09713024        42706.10
## 5 0.7049005  0.91255962        41742.06
## 6 0.2927956  0.11830443        40543.76
## [1] "Cucurbita pepo fraterna"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       14 1.523031 0.6649710 55165     1.00000000
## 2          ZonationSPP       13 1.801460 0.7904401 14756     0.26748844
## 3           ZonationZV       13 1.767151 0.7892158 11192     0.20288226
## 4      ZonationProxiDG       12 1.581148 0.7282697  4869     0.08826249
## 5 ZonationProxiDGvsSPP       14 2.154054 0.8626965  6789     0.12306716
## 6     ZonationSPP_ADMU       14 1.419635 0.6124053 16777     0.30412399
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.5065297   0.4113230        25801.41
## 3 0.4030893   0.2348452        27496.95
## 4 0.3128970   0.1878900        30515.72
## 5 0.5666447   0.5351751        30026.50
## 6 0.4852841   0.3591302        21797.07
## [1] "Cucurbita radicans"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       26 2.038032 0.8215677 118498     1.00000000
## 2          ZonationSPP       25 1.920057 0.8131564  31638     0.26699185
## 3           ZonationZV       18 1.854471 0.8090279  25022     0.21115968
## 4      ZonationProxiDG       20 2.158909 0.8460258  10750     0.09071883
## 5 ZonationProxiDGvsSPP       26 2.642752 0.9085519  18883     0.15935290
## 6     ZonationSPP_ADMU       24 2.151307 0.8479341  12322     0.10398488
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2866777  0.20456731        37997.99
## 3 0.1844574  0.05094383        40737.91
## 4 0.2781441  0.07255373        47989.23
## 5 0.6935150  0.89444473        46180.80
## 6 0.2568920  0.10745039        45316.44
## [1] "Gossypium aridum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       54 3.176943 0.9458373 334462     1.00000000
## 2          ZonationSPP       49 2.766485 0.9016497  35844     0.10716913
## 3           ZonationZV       40 2.690867 0.9009973  21657     0.06475175
## 4      ZonationProxiDG       44 3.195526 0.9557460  51775     0.15480084
## 5 ZonationProxiDGvsSPP       54 3.549131 0.9668081  57064     0.17061430
## 6     ZonationSPP_ADMU       53 3.143760 0.9400599  30619     0.09154702
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1544491  0.06861270        70372.12
## 3 0.1006741  0.01953233        73874.25
## 4 0.2607088  0.12953301        69139.60
## 5 0.5465664  0.39626746        68933.33
## 6 0.1845294  0.10281482        70692.06
## [1] "Gossypium davidsonii"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       12 1.911161 0.8060448 118125     1.00000000
## 2          ZonationSPP       12 1.519319 0.7506243  17000     0.14391534
## 3           ZonationZV       11 1.686507 0.7931053  26470     0.22408466
## 4      ZonationProxiDG       12 2.062699 0.8539628  13483     0.11414180
## 5 ZonationProxiDGvsSPP       12 2.243877 0.8718903   8504     0.07199153
## 6     ZonationSPP_ADMU       12 1.768174 0.8004242  15308     0.12959153
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1472626  0.04715613        45878.68
## 3 0.2402001  0.11728301        43142.56
## 4 0.2185096  0.13633090        47754.42
## 5 0.2757074  0.13375313        49914.90
## 6 0.1230507  0.09758564        45802.69
## [1] "Gossypium gossypioides"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       17 1.810979 0.7667819 16653      1.0000000
## 2          ZonationSPP       14 1.630590 0.7290179 11664      0.7004143
## 3           ZonationZV       14 1.669849 0.7527787 11189      0.6718910
## 4      ZonationProxiDG       16 2.000970 0.8381286  5996      0.3600552
## 5 ZonationProxiDGvsSPP       17 2.186545 0.8618715  7471      0.4486279
## 6     ZonationSPP_ADMU       17 1.962569 0.8221942  5129      0.3079926
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.3825317   0.2812500        2064.891
## 3 0.5373821   0.6285047        2694.052
## 4 0.5507731   0.5937500        6243.583
## 5 0.8294209   0.9852941        5528.003
## 6 0.5026154   0.3072338        6066.306
## [1] "Gossypium harknesii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness   shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp        8 1.2008696 0.6662204 26686      1.0000000
## 2          ZonationSPP        7 1.1828921 0.6517698 11128      0.4169977
## 3           ZonationZV        4 1.1685401 0.6768485 11624      0.4355842
## 4      ZonationProxiDG        4 0.9860941 0.5961579  3598      0.1348273
## 5 ZonationProxiDGvsSPP        8 1.6153141 0.7748724  2809      0.1052612
## 6     ZonationSPP_ADMU        8 1.2300744 0.6862326  9267      0.3472607
##    mean.prop median.prop Dist.to.Optimun
## 1         NA          NA           0.000
## 2 0.50357621 0.419117019        9682.107
## 3 0.29704419 0.179989751        8986.624
## 4 0.05202506 0.005681818       13238.403
## 5 0.62151086 0.851325758       14245.956
## 6 0.58954666 0.616462711       10488.702
## [1] "Gossypium hirsutum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       61 3.227550 0.9307643 420906     1.00000000
## 2          ZonationSPP       55 3.183042 0.9420378  49453     0.11749179
## 3           ZonationZV       51 2.767494 0.8989521  40012     0.09506161
## 4      ZonationProxiDG       52 3.462969 0.9641493  59536     0.14144726
## 5 ZonationProxiDGvsSPP       61 3.802710 0.9747267  57900     0.13756041
## 6     ZonationSPP_ADMU       60 3.181657 0.9259123  44797     0.10642994
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2751713  0.11031390       104717.04
## 3 0.2404518  0.06077914       105707.06
## 4 0.3386603  0.17127763       104165.74
## 5 0.4657398  0.32953020       104377.39
## 6 0.2151326  0.10344828        99259.31
## [1] "Gossypium thurberi"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       13 1.409299 0.7295608 118141     1.00000000
## 2          ZonationSPP        9 1.339538 0.7159201  12560     0.10631364
## 3           ZonationZV        9 1.075278 0.5305789  11322     0.09583464
## 4      ZonationProxiDG        6 1.303255 0.6845740   3042     0.02574889
## 5 ZonationProxiDGvsSPP       13 1.852870 0.7980166   4759     0.04028237
## 6     ZonationSPP_ADMU       13 1.395138 0.7353367  25653     0.21713884
##    mean.prop median.prop Dist.to.Optimun
## 1         NA          NA            0.00
## 2 0.08045636  0.04958678        55970.19
## 3 0.18876085  0.02322401        56343.29
## 4 0.09672674  0.00000000        60137.81
## 5 0.65219080  1.00000000        59586.36
## 6 0.29308793  0.17142857        50540.97
## [1] "Persea albida"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       27 2.031521 0.7989998 21096      1.0000000
## 2          ZonationSPP       26 2.016224 0.7977680 15096      0.7155859
## 3           ZonationZV       27 1.833952 0.7735263 14099      0.6683257
## 4      ZonationProxiDG       26 2.239214 0.8465747  8361      0.3963311
## 5 ZonationProxiDGvsSPP       27 2.480788 0.8912402  9175      0.4349166
## 6     ZonationSPP_ADMU       25 2.254358 0.8531253  5292      0.2508532
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.6759195   0.7147385        3538.015
## 3 0.6469096   0.7272727        3838.130
## 4 0.6498921   0.7037037        7024.993
## 5 0.8572890   1.0000000        6866.233
## 6 0.4666851   0.3307593        7778.908
## [1] "Persea americana"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       78 3.672020 0.9630866 535525      1.0000000
## 2          ZonationSPP       74 3.590925 0.9644504  96965      0.1810653
## 3           ZonationZV       71 3.518972 0.9576855  93160      0.1739601
## 4      ZonationProxiDG       73 3.968881 0.9792213 106021      0.1979758
## 5 ZonationProxiDGvsSPP       78 4.070848 0.9808247 104251      0.1946707
## 6     ZonationSPP_ADMU       77 3.578001 0.9588385  66117      0.1234620
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3128248   0.1513505        92803.99
## 3 0.3552368   0.1791425        93610.19
## 4 0.4784588   0.3140926        93300.00
## 5 0.5090175   0.3899086        92631.88
## 6 0.1891544   0.1042046        90767.36
## [1] "Persea caerulea"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       12 1.393923 0.6712677 15661      1.0000000
## 2          ZonationSPP       11 1.268939 0.6453322 10474      0.6687951
## 3           ZonationZV       12 1.411835 0.6914950 11330      0.7234532
## 4      ZonationProxiDG       11 1.616894 0.7252651  4984      0.3182428
## 5 ZonationProxiDGvsSPP       12 1.871482 0.8115177  4951      0.3161356
## 6     ZonationSPP_ADMU       11 1.520443 0.7205186  3695      0.2359364
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.5411298   0.5181003        3576.853
## 3 0.7346154   0.8509777        3457.822
## 4 0.5901941   0.5020526        6956.255
## 5 0.8114683   1.0000000        7422.265
## 6 0.3732194   0.3041667        7337.712
## [1] "Persea donnell smithii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       17 1.555843 0.7135722 19573      1.0000000
## 2          ZonationSPP       15 1.215561 0.6133786 12028      0.6145200
## 3           ZonationZV       16 1.504083 0.6898949 11467      0.5858581
## 4      ZonationProxiDG       14 1.669161 0.7469255  7122      0.3638686
## 5 ZonationProxiDGvsSPP       17 2.007639 0.8223333  6604      0.3374036
## 6     ZonationSPP_ADMU       16 1.477901 0.6739874  4129      0.2109539
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.6781369   0.9166667        4195.319
## 3 0.6486987   0.7732143        5408.784
## 4 0.5383561   0.4764716        8180.219
## 5 0.8246671   1.0000000        8119.254
## 6 0.4138170   0.2780488        8353.029
## [1] "Persea hintonii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       40 2.781610 0.9159654 107784      1.0000000
## 2          ZonationSPP       35 2.647768 0.9126671  31275      0.2901637
## 3           ZonationZV       36 2.398920 0.8870678  19727      0.1830235
## 4      ZonationProxiDG       31 2.742911 0.9251550  28671      0.2660042
## 5 ZonationProxiDGvsSPP       40 3.130853 0.9473275  30348      0.2815631
## 6     ZonationSPP_ADMU       40 2.777411 0.9154605  12520      0.1161582
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3763816   0.2951043        23753.19
## 3 0.3207556   0.1229356        26589.12
## 4 0.4170708   0.2264142        24811.60
## 5 0.6610946   0.6694918        25313.58
## 6 0.2349493   0.1067740        27883.16
## [1] "Persea liebmannii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       67 3.313460 0.9488171 194561      1.0000000
## 2          ZonationSPP       63 3.198971 0.9412424  58835      0.3023987
## 3           ZonationZV       61 3.239969 0.9464707  53696      0.2759854
## 4      ZonationProxiDG       63 3.574114 0.9668286  59996      0.3083660
## 5 ZonationProxiDGvsSPP       67 3.729445 0.9707523  57299      0.2945040
## 6     ZonationSPP_ADMU       66 3.150902 0.9246652  30891      0.1587728
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3996591   0.3958455        33428.13
## 3 0.4119329   0.2998336        34921.11
## 4 0.5330368   0.4469961        35600.77
## 5 0.6803536   0.7442424        35862.94
## 6 0.2573113   0.1373232        36188.81
## [1] "Persea longipes"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       28 2.386877 0.8771164 35231      1.0000000
## 2          ZonationSPP       25 2.196114 0.8449534 13475      0.3824757
## 3           ZonationZV       25 1.974828 0.8119032 11433      0.3245153
## 4      ZonationProxiDG       24 2.349291 0.8659661  6929      0.1966734
## 5 ZonationProxiDGvsSPP       28 2.772150 0.9269086 10744      0.3049587
## 6     ZonationSPP_ADMU       24 2.365325 0.8794771  8511      0.2415770
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.4638399   0.4285714        8299.524
## 3 0.4506665   0.4135470        8599.492
## 4 0.5109334   0.5105263       10995.848
## 5 0.7337430   0.9678676        9907.626
## 6 0.3305539   0.1507749        9967.344
## [1] "Persea pallescens"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       38 2.930099 0.9353575 38311      1.0000000
## 2          ZonationSPP       34 2.777789 0.9208327 20265      0.5289604
## 3           ZonationZV       30 2.640459 0.9068924 17776      0.4639921
## 4      ZonationProxiDG       30 2.775185 0.9223024 18227      0.4757641
## 5 ZonationProxiDGvsSPP       38 3.152129 0.9508568 16295      0.4253348
## 6     ZonationSPP_ADMU       37 2.783033 0.9116788  6648      0.1735272
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.5288863   0.5416198        5338.958
## 3 0.4885949   0.5060005        6111.110
## 4 0.4654494   0.3374294        5982.944
## 5 0.7575046   1.0000000        6570.871
## 6 0.2841084   0.1668172        8002.137
## [1] "Persea podadenia"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       24 2.475565 0.8989770 278805     1.00000000
## 2          ZonationSPP       24 2.614423 0.9116849  17071     0.06122917
## 3           ZonationZV       21 1.997844 0.8026154  23907     0.08574810
## 4      ZonationProxiDG       21 2.340774 0.8845780  17420     0.06248095
## 5 ZonationProxiDGvsSPP       24 2.831997 0.9302777  28739     0.10307921
## 6     ZonationSPP_ADMU       23 2.561838 0.9066494  24952     0.08949624
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1839584  0.07691111        84832.75
## 3 0.2131797  0.04455557        83483.01
## 4 0.1547741  0.07690391        83996.00
## 5 0.4567130  0.25080102        82005.62
## 6 0.1605592  0.10165240        81585.42
## [1] "Persea purpusii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       14 1.809947 0.7556937 24369      1.0000000
## 2          ZonationSPP       13 1.820119 0.7885455 10170      0.4173335
## 3           ZonationZV       13 1.652318 0.7374851 11497      0.4717879
## 4      ZonationProxiDG        9 1.477758 0.7339889  4816      0.1976281
## 5 ZonationProxiDGvsSPP       14 2.323842 0.8847609  6390      0.2622184
## 6     ZonationSPP_ADMU       14 1.687933 0.7087319 11447      0.4697361
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.3940318   0.3202779        7641.861
## 3 0.4065382   0.4084889        6280.218
## 4 0.2247502   0.1205193       10123.858
## 5 0.6059881   0.5168532       10149.497
## 6 0.5319144   0.4207388        6126.862
## [1] "Persea schiedeana"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       42 2.712108 0.9093644 156877      1.0000000
## 2          ZonationSPP       36 2.612615 0.9015739  37402      0.2384161
## 3           ZonationZV       35 2.516065 0.8823365  41437      0.2641369
## 4      ZonationProxiDG       36 3.003199 0.9415966  34705      0.2212243
## 5 ZonationProxiDGvsSPP       42 3.167860 0.9493668  32169      0.2050587
## 6     ZonationSPP_ADMU       40 2.724321 0.9138460  20073      0.1279537
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3432457   0.2733412        40086.48
## 3 0.4558013   0.3752278        37097.67
## 4 0.5552000   0.6057023        41562.83
## 5 0.6669372   0.8912729        41044.95
## 6 0.1965201   0.1170400        41595.50
## [1] "Persea vesticula"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       12 1.395002 0.6867649 15507      1.0000000
## 2          ZonationSPP       11 1.348000 0.6663643 12067      0.7781647
## 3           ZonationZV       11 1.404592 0.6894051 12373      0.7978977
## 4      ZonationProxiDG       10 1.618254 0.7353081  6195      0.3994970
## 5 ZonationProxiDGvsSPP       12 1.744881 0.7772759  5618      0.3622880
## 6     ZonationSPP_ADMU       12 1.572142 0.7443065  4153      0.2678145
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.6810657   0.7420519        2360.041
## 3 0.7385819   0.7902018        2365.519
## 4 0.6183623   0.6413915        6177.148
## 5 0.8122929   1.0000000        6355.560
## 6 0.5266471   0.3895017        6925.696
## [1] "Phaseolus acolius acolius"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       38 2.504516 0.8825303 290302     1.00000000
## 2          ZonationSPP       35 2.317695 0.8296423  25877     0.08913821
## 3           ZonationZV       32 2.018451 0.8088736  29217     0.10064347
## 4      ZonationProxiDG       32 2.709479 0.9233754  27323     0.09411923
## 5 ZonationProxiDGvsSPP       38 3.116360 0.9459243  33475     0.11531095
## 6     ZonationSPP_ADMU       37 2.498985 0.8783477  26198     0.09024395
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2397674  0.10024144        92203.05
## 3 0.1681227  0.04211668        91375.94
## 4 0.1758487  0.07195493        93913.99
## 5 0.5608374  0.49952765        92744.70
## 6 0.3011393  0.10939307        90508.97
## [1] "Phaseolus acolius tenuifolius"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       63 3.100174 0.9338556 919547     1.00000000
## 2          ZonationSPP       58 3.217364 0.9422056  95366     0.10370976
## 3           ZonationZV       53 3.107003 0.9386682  96691     0.10515069
## 4      ZonationProxiDG       58 3.661537 0.9717798  80927     0.08800746
## 5 ZonationProxiDGvsSPP       63 3.695559 0.9710165  91813     0.09984590
## 6     ZonationSPP_ADMU       60 3.169101 0.9370777  84822     0.09224325
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3120024  0.20036485        222888.3
## 3 0.2856545  0.06989895        224883.6
## 4 0.4103628  0.25965467        228261.9
## 5 0.5014892  0.36776918        224320.5
## 6 0.1802853  0.10376096        216147.8
## [1] "Phaseolus angustissimus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       21 1.776705 0.7483591 336963     1.00000000
## 2          ZonationSPP       13 1.850352 0.8032681  17799     0.05282182
## 3           ZonationZV       13 1.864193 0.7893131  18624     0.05527016
## 4      ZonationProxiDG       13 2.099999 0.8548130  13220     0.03923279
## 5 ZonationProxiDGvsSPP       21 2.548261 0.9073741  15598     0.04628995
## 6     ZonationSPP_ADMU       20 1.971713 0.8055251  37888     0.11243964
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.1073273  0.07569940        164405.5
## 3 0.1602608  0.01515950        165962.4
## 4 0.1378557  0.03157122        165505.0
## 5 0.5200253  0.30608886        165367.8
## 6 0.2858247  0.13145182        153274.9
## [1] "Phaseolus chiapasanus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       41 2.845998 0.9223790 80964      1.0000000
## 2          ZonationSPP       36 2.410859 0.8653860 23778      0.2936861
## 3           ZonationZV       34 2.337860 0.8586361 23247      0.2871276
## 4      ZonationProxiDG       38 3.007654 0.9371833 23715      0.2929080
## 5 ZonationProxiDGvsSPP       41 3.168191 0.9481719 27729      0.3424855
## 6     ZonationSPP_ADMU       39 2.600559 0.8912416 12165      0.1502520
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3958039   0.1856061        17596.44
## 3 0.3967151   0.1474245        17746.60
## 4 0.5367734   0.5119048        18140.79
## 5 0.7098033   0.7310559        16868.30
## 6 0.2561432   0.1545293        19008.19
## [1] "Phaseolus coccineus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       68 3.139576 0.9255544 417852      1.0000000
## 2          ZonationSPP       64 3.354340 0.9527086  93249      0.2231627
## 3           ZonationZV       60 3.316450 0.9488125  72421      0.1733173
## 4      ZonationProxiDG       61 3.642503 0.9697499  71511      0.1711395
## 5 ZonationProxiDGvsSPP       68 3.741786 0.9716398  86352      0.2066569
## 6     ZonationSPP_ADMU       66 3.325627 0.9442098  45174      0.1081100
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3746945   0.3245743        100450.8
## 3 0.3667165   0.2255192        103366.8
## 4 0.4312487   0.3309801        107257.0
## 5 0.6187359   0.5584920        103223.2
## 6 0.2367439   0.1020067        103661.6
## [1] "Phaseolus filiformis"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       18 2.116032 0.8499234 207275     1.00000000
## 2          ZonationSPP       14 1.621571 0.7618803  21921     0.10575805
## 3           ZonationZV       13 2.015898 0.8510254  43484     0.20978893
## 4      ZonationProxiDG       15 2.313701 0.8915798  19899     0.09600289
## 5 ZonationProxiDGvsSPP       18 2.509307 0.9081812  15929     0.07684960
## 6     ZonationSPP_ADMU       18 1.956183 0.8212657  19326     0.09323845
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1222058  0.05354508        71802.99
## 3 0.2881135  0.12582182        67701.40
## 4 0.2525269  0.07971501        74822.78
## 5 0.4179737  0.20152665        76199.07
## 6 0.2051027  0.10143623        72515.48
## [1] "Phaseolus glabellus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       17 1.759909 0.7869111 26548      1.0000000
## 2          ZonationSPP       16 1.709514 0.7737983 14277      0.5377806
## 3           ZonationZV       15 1.771776 0.8184335 11860      0.4467380
## 4      ZonationProxiDG       14 1.800013 0.8101427  8414      0.3169354
## 5 ZonationProxiDGvsSPP       17 2.025669 0.8458610  8418      0.3170860
## 6     ZonationSPP_ADMU       17 1.624343 0.7354095  7138      0.2688715
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.4871273   0.5745646        6018.394
## 3 0.4250303   0.2830189        8208.088
## 4 0.4138722   0.2924528        9507.042
## 5 0.7738912   0.9836066        9342.883
## 6 0.3821150   0.3584906        8768.306
## [1] "Phaseolus jaliscanus"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       26 2.298852 0.8619277 30800      1.0000000
## 2          ZonationSPP       26 1.833987 0.7777301 15099      0.4902273
## 3           ZonationZV       17 1.680363 0.7264425 11789      0.3827597
## 4      ZonationProxiDG       22 2.024445 0.8324530 10044      0.3261039
## 5 ZonationProxiDGvsSPP       26 2.620878 0.9031945 11956      0.3881818
## 6     ZonationSPP_ADMU       25 2.415415 0.8863342  4713      0.1530195
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.4208780   0.3261878        5241.964
## 3 0.2934353   0.1171076        6691.196
## 4 0.3614161   0.1294576        8014.758
## 5 0.7609227   0.9530281        7986.061
## 6 0.3002099   0.1553524        9939.732
## [1] "Phaseolus leptostachyus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       68 3.288266 0.9457308 422741      1.0000000
## 2          ZonationSPP       59 3.116966 0.9347849  82339      0.1947741
## 3           ZonationZV       60 3.131688 0.9376438  68157      0.1612264
## 4      ZonationProxiDG       62 3.577427 0.9687272  65181      0.1541866
## 5 ZonationProxiDGvsSPP       68 3.668655 0.9712176  81999      0.1939698
## 6     ZonationSPP_ADMU       64 3.300401 0.9487118  47623      0.1126529
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2716081   0.1761474        81229.32
## 3 0.3604641   0.1960980        85202.77
## 4 0.4276655   0.3025478        90648.00
## 5 0.5928080   0.4897269        87406.05
## 6 0.2307082   0.1201831        88543.08
## [1] "Phaseolus lunatus silvester"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       60 3.364456 0.9460388 571562     1.00000000
## 2          ZonationSPP       55 3.206935 0.9448856  49512     0.08662577
## 3           ZonationZV       52 2.927197 0.9153218  41995     0.07347409
## 4      ZonationProxiDG       54 3.630319 0.9713810  81195     0.14205808
## 5 ZonationProxiDGvsSPP       60 3.795330 0.9748544  73395     0.12841127
## 6     ZonationSPP_ADMU       59 3.249569 0.9353393  50864     0.08899122
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.1758699  0.07650816        126145.8
## 3 0.1519057  0.04157664        127824.1
## 4 0.2817797  0.16567696        124211.9
## 5 0.4493052  0.24819630        124392.6
## 6 0.1382835  0.09733729        120244.8
## [1] "Phaseolus maculatus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       39 2.278098 0.8483775 328478     1.00000000
## 2          ZonationSPP       38 2.667261 0.9066362  27683     0.08427657
## 3           ZonationZV       34 2.526546 0.8941600  18393     0.05599462
## 4      ZonationProxiDG       31 2.880978 0.9292471  22643     0.06893308
## 5 ZonationProxiDGvsSPP       39 3.129158 0.9438776  30293     0.09222231
## 6     ZonationSPP_ADMU       38 2.401405 0.8652408  22581     0.06874433
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2888752  0.18852459        121337.4
## 3 0.2829775  0.06274078        123629.7
## 4 0.3670021  0.12371134        124439.6
## 5 0.6096250  0.80620155        121645.8
## 6 0.1836967  0.11348315        120091.7
## [1] "Phaseolus micranthus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       56 3.236555 0.9484990 261071     1.00000000
## 2          ZonationSPP       52 3.073594 0.9358325  42816     0.16400136
## 3           ZonationZV       48 2.904704 0.9218166  29180     0.11177036
## 4      ZonationProxiDG       52 3.286293 0.9573170  52049     0.19936722
## 5 ZonationProxiDGvsSPP       56 3.544901 0.9649520  56506     0.21643921
## 6     ZonationSPP_ADMU       54 3.280026 0.9487408  20975     0.08034213
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3178692  0.13654184        52061.65
## 3 0.3281058  0.08307490        55577.04
## 4 0.4159294  0.28832889        51401.21
## 5 0.5665732  0.45230971        50120.05
## 6 0.1448117  0.09755353        54717.57
## [1] "Phaseolus microcarpus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       53 3.051042 0.9244969 254960      1.0000000
## 2          ZonationSPP       43 2.432531 0.8362278  40087      0.1572286
## 3           ZonationZV       41 2.404619 0.8478811  30087      0.1180067
## 4      ZonationProxiDG       41 3.179373 0.9513203  43285      0.1697717
## 5 ZonationProxiDGvsSPP       53 3.496387 0.9644654  45930      0.1801459
## 6     ZonationSPP_ADMU       51 3.003395 0.9228005  28154      0.1104252
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2030644  0.08231459        56798.62
## 3 0.1897646  0.03811463        60959.85
## 4 0.2752974  0.12302620        64208.57
## 5 0.5605554  0.44091456        63544.42
## 6 0.2191653  0.10300012        62528.17
## [1] "Phaseolus parvifolius"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       53 2.864278 0.9196176 321070     1.00000000
## 2          ZonationSPP       45 2.722042 0.9038950  46305     0.14422089
## 3           ZonationZV       37 2.580939 0.8943947  31152     0.09702557
## 4      ZonationProxiDG       44 3.093649 0.9447151  31714     0.09877597
## 5 ZonationProxiDGvsSPP       53 3.404103 0.9592985  43022     0.13399570
## 6     ZonationSPP_ADMU       52 2.934039 0.9289258  30710     0.09564892
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2322728  0.08548387        81004.81
## 3 0.2059477  0.03995596        84070.96
## 4 0.3517474  0.11527631        86422.63
## 5 0.5822447  0.52618243        84596.07
## 6 0.2185122  0.11739865        83195.61
## [1] "Phaseolus parvulus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       20 1.874584 0.8061556 140336      1.0000000
## 2          ZonationSPP       18 2.101350 0.8539649  17657      0.1258195
## 3           ZonationZV       17 1.841442 0.7830820  17220      0.1227055
## 4      ZonationProxiDG       12 2.110119 0.8675042  16211      0.1155156
## 5 ZonationProxiDGvsSPP       20 2.417943 0.8903362  15532      0.1106772
## 6     ZonationSPP_ADMU       18 1.839390 0.7855472  16056      0.1144111
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3279739  0.17231339        56390.74
## 3 0.2404290  0.10790531        57734.95
## 4 0.1742918  0.03509056        58051.28
## 5 0.6275244  0.81915485        57972.82
## 6 0.2080100  0.11401021        55412.53
## [1] "Phaseolus pauciflorus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       49 2.773784 0.9027117 271206     1.00000000
## 2          ZonationSPP       43 2.838398 0.9242177  57832     0.21324012
## 3           ZonationZV       37 2.794101 0.9205913  45759     0.16872414
## 4      ZonationProxiDG       42 3.050716 0.9454678  39403     0.14528808
## 5 ZonationProxiDGvsSPP       49 3.297902 0.9556419  48654     0.17939869
## 6     ZonationSPP_ADMU       47 2.763666 0.9005823  26248     0.09678252
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3084045   0.1829971        73941.83
## 3 0.2505699   0.1134865        76231.96
## 4 0.3568639   0.1570252        79924.74
## 5 0.6272152   0.6125385        76842.85
## 6 0.2474452   0.1003697        76456.62
## [1] "Phaseolus pedicellatus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       48 2.870531 0.9161951 140776      1.0000000
## 2          ZonationSPP       47 2.877661 0.9293951  49824      0.3539240
## 3           ZonationZV       42 2.772953 0.9115372  35779      0.2541555
## 4      ZonationProxiDG       41 3.066173 0.9446892  36493      0.2592274
## 5 ZonationProxiDGvsSPP       48 3.277753 0.9541629  40761      0.2895451
## 6     ZonationSPP_ADMU       47 2.859592 0.9147799  20671      0.1468361
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4860969   0.4156309        31244.27
## 3 0.4043898   0.2506706        33434.78
## 4 0.4225414   0.2984936        35436.29
## 5 0.7116698   0.8993500        33596.89
## 6 0.3393299   0.1795135        36117.94
## [1] "Phaseolus perplexus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       50 2.963228 0.9335657 161839      1.0000000
## 2          ZonationSPP       44 2.680825 0.9103554  41217      0.2546790
## 3           ZonationZV       38 2.620763 0.8985378  32575      0.2012803
## 4      ZonationProxiDG       41 3.054744 0.9448610  36933      0.2282083
## 5 ZonationProxiDGvsSPP       50 3.306005 0.9570227  44723      0.2763425
## 6     ZonationSPP_ADMU       46 2.958569 0.9359578  16565      0.1023548
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2868533  0.12909725        33436.85
## 3 0.2729307  0.07919339        35378.96
## 4 0.4199680  0.29340272        35978.86
## 5 0.7065483  0.98892551        34103.46
## 6 0.1943431  0.10241556        37661.86
## [1] "Phaseolus pluriflorus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       33 2.379244 0.8689970 95598      1.0000000
## 2          ZonationSPP       32 2.387649 0.8774678 32243      0.3372769
## 3           ZonationZV       31 2.284425 0.8635007 26845      0.2808113
## 4      ZonationProxiDG       30 2.509554 0.9013375 21170      0.2214481
## 5 ZonationProxiDGvsSPP       33 2.866780 0.9283414 23209      0.2427770
## 6     ZonationSPP_ADMU       32 2.554369 0.8931463 11097      0.1160798
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4779008   0.4654378        26715.46
## 3 0.4405415   0.4389648        27820.19
## 4 0.4996062   0.4220183        30708.03
## 5 0.7113933   0.9523810        29814.23
## 6 0.3092258   0.1594951        31074.55
## [1] "Phaseolus ritensis"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       32 2.208926 0.8520678 291872     1.00000000
## 2          ZonationSPP       27 2.465163 0.8960273  28950     0.09918731
## 3           ZonationZV       26 2.304332 0.8601967  22609     0.07746204
## 4      ZonationProxiDG       25 2.547995 0.9139962  25391     0.08699361
## 5 ZonationProxiDGvsSPP       32 2.802691 0.9240510  25941     0.08887800
## 6     ZonationSPP_ADMU       32 2.157000 0.8457424  31365     0.10746149
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3345869  0.15232628        104100.3
## 3 0.3222070  0.05722554        107844.0
## 4 0.3243292  0.10759858        107241.5
## 5 0.5972302  0.74429634        106625.5
## 6 0.2995956  0.11020507        100873.2
## [1] "Phaseolus scabrellus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       30 2.344051 0.8731084 273446     1.00000000
## 2          ZonationSPP       28 2.572922 0.9034587  28066     0.10263818
## 3           ZonationZV       26 2.338689 0.8620962  24275     0.08877438
## 4      ZonationProxiDG       25 2.457378 0.9032285  18466     0.06753070
## 5 ZonationProxiDGvsSPP       30 2.909706 0.9363376  26724     0.09773045
## 6     ZonationSPP_ADMU       29 2.328426 0.8699108  34897     0.12761935
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2492034  0.14929005        89948.53
## 3 0.2728436  0.11324587        92194.63
## 4 0.2470946  0.04960097        93475.66
## 5 0.5289830  0.37184812        91707.34
## 6 0.2547865  0.11953835        86327.91
## [1] "Phaseolus vulgarisl"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       60 3.187809 0.9377518 308454      1.0000000
## 2          ZonationSPP       57 2.960281 0.9235900  72097      0.2337366
## 3           ZonationZV       54 2.942904 0.9197487  55786      0.1808568
## 4      ZonationProxiDG       54 3.503633 0.9657916  59853      0.1940419
## 5 ZonationProxiDGvsSPP       60 3.597711 0.9682026  68462      0.2219521
## 6     ZonationSPP_ADMU       59 3.271591 0.9449536  34237      0.1109955
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3000394   0.1967160        59912.56
## 3 0.3282925   0.2034021        64512.73
## 4 0.4449208   0.3168237        69260.02
## 5 0.5907936   0.4669158        67587.63
## 6 0.2481259   0.1197534        69065.72
## [1] "Physalis acolia"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       55 3.149567 0.9403533 498689     1.00000000
## 2          ZonationSPP       44 2.937138 0.9300688  42581     0.08538588
## 3           ZonationZV       43 2.337853 0.8734226  56591     0.11347954
## 4      ZonationProxiDG       46 3.202364 0.9535261  47166     0.09457999
## 5 ZonationProxiDGvsSPP       55 3.595390 0.9653275  42222     0.08466599
## 6     ZonationSPP_ADMU       54 3.086033 0.9404052  54892     0.11007261
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.1122045  0.04182820        113802.6
## 3 0.1246503  0.01272488        108741.3
## 4 0.1924334  0.07424498        114029.8
## 5 0.4257760  0.19671803        115235.3
## 6 0.1471238  0.10000000        109450.0
## [1] "Physalis angulata"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson    Area Prop_to_AreaSP
## 1               ENM_sp       91 3.609054 0.9573431 1435760     1.00000000
## 2          ZonationSPP       85 3.643900 0.9604847  130119     0.09062726
## 3           ZonationZV       82 3.538147 0.9585071  138200     0.09625564
## 4      ZonationProxiDG       87 4.146595 0.9826222  121943     0.08493272
## 5 ZonationProxiDGvsSPP       91 4.181166 0.9822139  134884     0.09394606
## 6     ZonationSPP_ADMU       90 3.660166 0.9613558  132086     0.09199727
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2458078  0.12816901        281863.9
## 3 0.2837860  0.09956377        283630.2
## 4 0.3512931  0.18231973        286462.2
## 5 0.4029350  0.23431225        283017.1
## 6 0.1611642  0.09871960        271658.1
## [1] "Physalis angustiphysa"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       61 3.112287 0.9240403 471541     1.00000000
## 2          ZonationSPP       56 3.068952 0.9284587  80788     0.17132763
## 3           ZonationZV       55 3.047376 0.9316752  62811     0.13320369
## 4      ZonationProxiDG       58 3.631047 0.9694528  61849     0.13116357
## 5 ZonationProxiDGvsSPP       61 3.767379 0.9719420  71390     0.15139723
## 6     ZonationSPP_ADMU       59 3.170673 0.9324400  43203     0.09162088
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3086278  0.19591837        115094.7
## 3 0.3284411  0.15423586        119728.2
## 4 0.4066645  0.24132786        124137.8
## 5 0.5144529  0.41698565        121034.1
## 6 0.1474633  0.09993998        119228.3
## [1] "Physalis campechiana"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       56 2.825743 0.8983111 313724      1.0000000
## 2          ZonationSPP       46 2.938368 0.9291232  40880      0.1303056
## 3           ZonationZV       44 2.563110 0.8682952  31728      0.1011335
## 4      ZonationProxiDG       49 3.161926 0.9466703  34030      0.1084711
## 5 ZonationProxiDGvsSPP       56 3.644714 0.9687294  40096      0.1278066
## 6     ZonationSPP_ADMU       53 2.885720 0.9020500  38955      0.1241697
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2182798  0.13853610        94286.74
## 3 0.2046075  0.03795277        95230.90
## 4 0.2649607  0.08692842        94536.74
## 5 0.5995160  0.62355773        94967.73
## 6 0.1938101  0.12773705        88453.35
## [1] "Physalis caudella"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       43 2.523459 0.8742634 462877     1.00000000
## 2          ZonationSPP       37 3.010031 0.9387827  64317     0.13895052
## 3           ZonationZV       35 2.926109 0.9292766  50624     0.10936815
## 4      ZonationProxiDG       34 3.037553 0.9462800  41223     0.08905822
## 5 ZonationProxiDGvsSPP       43 3.259973 0.9519742  49841     0.10767655
## 6     ZonationSPP_ADMU       42 2.588600 0.8762432  54142     0.11696844
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3586554   0.2857143        153301.7
## 3 0.2930661   0.1293266        156810.1
## 4 0.3234735   0.1375395        158497.2
## 5 0.5493293   0.4458537        156378.2
## 6 0.2760846   0.1117293        145499.1
## [1] "Physalis chenopodifolia"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       61 2.894704 0.9056719 431526     1.00000000
## 2          ZonationSPP       57 3.101712 0.9368389  72405     0.16778827
## 3           ZonationZV       56 3.105282 0.9364834  59098     0.13695119
## 4      ZonationProxiDG       54 3.509640 0.9650164  56938     0.13194570
## 5 ZonationProxiDGvsSPP       61 3.648427 0.9687086  65975     0.15288766
## 6     ZonationSPP_ADMU       59 2.992292 0.9233160  40131     0.09299787
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3109141  0.20731471        120721.4
## 3 0.3557561  0.19874406        122665.2
## 4 0.4235109  0.25586002        127367.6
## 5 0.5911322  0.53132657        124112.4
## 6 0.2191101  0.09979663        122616.5
## [1] "Physalis cinerascens"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       81 3.241897 0.9397098 982969     1.00000000
## 2          ZonationSPP       73 3.535576 0.9618018 124378     0.12653298
## 3           ZonationZV       73 3.415803 0.9553610 104745     0.10655982
## 4      ZonationProxiDG       79 3.853463 0.9764001  93566     0.09518713
## 5 ZonationProxiDGvsSPP       81 3.977244 0.9780546 106507     0.10835235
## 6     ZonationSPP_ADMU       79 3.310914 0.9412474 113946     0.11592024
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3578366   0.2694724        227552.8
## 3 0.3720339   0.2369043        228980.7
## 4 0.4248263   0.2721670        232759.8
## 5 0.5372281   0.4666667        229543.0
## 6 0.2502511   0.1112298        214160.6
## [1] "Physalis cordata"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       87 3.575064 0.9549512 618351      1.0000000
## 2          ZonationSPP       81 3.520668 0.9548150  97234      0.1572473
## 3           ZonationZV       76 3.374968 0.9471349  78309      0.1266417
## 4      ZonationProxiDG       78 3.899211 0.9771025 100012      0.1617399
## 5 ZonationProxiDGvsSPP       87 4.092291 0.9807471 103897      0.1680227
## 6     ZonationSPP_ADMU       86 3.590529 0.9546509  67281      0.1088071
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3092030   0.1428571        118434.1
## 3 0.2910056   0.1091039        121610.9
## 4 0.3896471   0.2174235        121280.8
## 5 0.5336011   0.4242132        121449.8
## 6 0.1836771   0.1026362        117141.7
## [1] "Physalis coztomatl"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       70 3.314806 0.9425700 444311      1.0000000
## 2          ZonationSPP       62 3.401140 0.9534049  99022      0.2228664
## 3           ZonationZV       60 3.277987 0.9443959  69446      0.1563004
## 4      ZonationProxiDG       66 3.750684 0.9740622  87371      0.1966438
## 5 ZonationProxiDGvsSPP       70 3.840109 0.9751548  95652      0.2152816
## 6     ZonationSPP_ADMU       66 3.487796 0.9585745  47856      0.1077083
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3101966   0.1999187        91567.34
## 3 0.3066409   0.1294708        95698.19
## 4 0.4548486   0.3180279        98372.36
## 5 0.5843437   0.5039176        95327.65
## 6 0.1801521   0.1007693        97255.66
## [1] "Physalis crassifolia"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       33 2.605799 0.9122347 392425     1.00000000
## 2          ZonationSPP       23 2.410087 0.8898625  40998     0.10447347
## 3           ZonationZV       24 2.230397 0.8762501  45365     0.11560171
## 4      ZonationProxiDG       24 2.697037 0.9257684  28788     0.07335924
## 5 ZonationProxiDGvsSPP       33 2.957146 0.9389825  22731     0.05792444
## 6     ZonationSPP_ADMU       33 2.660539 0.9198228  46959     0.11966363
##    mean.prop median.prop Dist.to.Optimun
## 1         NA          NA             0.0
## 2 0.09674387  0.04458599        105702.7
## 3 0.18794386  0.01600000        103898.4
## 4 0.19824765  0.06674672        109226.1
## 5 0.49231384  0.21269350        111385.9
## 6 0.25773265  0.13503759        104058.6
## [1] "Physalis glutinosa"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       36 2.232854 0.8505127 154005     1.00000000
## 2          ZonationSPP       31 2.498501 0.8935543  20666     0.13419045
## 3           ZonationZV       29 2.443889 0.8858776  13143     0.08534139
## 4      ZonationProxiDG       25 2.580391 0.9036094  12736     0.08269861
## 5 ZonationProxiDGvsSPP       36 2.917804 0.9340739  21458     0.13933314
## 6     ZonationSPP_ADMU       35 2.402754 0.8810814  18707     0.12147008
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3463026  0.15399379        54401.11
## 3 0.3277152  0.07896891        56286.58
## 4 0.3686594  0.11935192        57604.10
## 5 0.7016511  1.00000000        54850.26
## 6 0.3295132  0.20227273        54223.62
## [1] "Physalis gracilis"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       80 3.527979 0.9607753 454107      1.0000000
## 2          ZonationSPP       74 3.387909 0.9564053  82449      0.1815629
## 3           ZonationZV       71 3.282695 0.9473749  83212      0.1832432
## 4      ZonationProxiDG       71 3.751521 0.9732456  79297      0.1746218
## 5 ZonationProxiDGvsSPP       80 3.943481 0.9770394  83190      0.1831947
## 6     ZonationSPP_ADMU       79 3.453860 0.9551284  60623      0.1334994
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2709995   0.1573648        78252.00
## 3 0.3193009   0.1674883        77689.44
## 4 0.4494251   0.3098523        80881.77
## 5 0.5794467   0.4957633        79530.87
## 6 0.1821823   0.1041591        78393.71
## [1] "Physalis hederifolia"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson    Area Prop_to_AreaSP
## 1               ENM_sp       80 3.420422 0.9508040 1689392     1.00000000
## 2          ZonationSPP       74 3.606575 0.9637009  146082     0.08647016
## 3           ZonationZV       71 3.524797 0.9597032  138525     0.08199696
## 4      ZonationProxiDG       76 4.062794 0.9815243  130260     0.07710466
## 5 ZonationProxiDGvsSPP       80 4.066982 0.9804547  155926     0.09229711
## 6     ZonationSPP_ADMU       78 3.432572 0.9509284  165019     0.09767952
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2380009  0.08743709        358851.2
## 3 0.2766639  0.11953757        361109.1
## 4 0.3871421  0.20037733        363871.6
## 5 0.4379687  0.31108710        357903.2
## 6 0.1441003  0.10003147        338412.2
## [1] "Physalis heterophylla"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       17 1.826565 0.8054704 88371     1.00000000
## 2          ZonationSPP       15 2.014873 0.8409752 13712     0.15516402
## 3           ZonationZV       15 1.785321 0.7548024 14063     0.15913592
## 4      ZonationProxiDG       13 2.053232 0.8589583 12306     0.13925383
## 5 ZonationProxiDGvsSPP       17 2.329611 0.8880345  8466     0.09580066
## 6     ZonationSPP_ADMU       17 1.669866 0.7409450 14918     0.16881104
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3005462  0.20674468        35082.33
## 3 0.3259638  0.23529412        35434.83
## 4 0.3065900  0.09370117        35788.54
## 5 0.5806407  0.75517891        36823.04
## 6 0.3733100  0.24959872        32973.63
## [1] "Physalis ignota"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp       10 1.203360 0.6068403  341      1.0000000
## 2          ZonationSPP       10 1.203360 0.6068403  341      1.0000000
## 3           ZonationZV        8 1.121294 0.5818540  309      0.9061584
## 4      ZonationProxiDG       10 1.188717 0.6011344  338      0.9912023
## 5 ZonationProxiDGvsSPP       10 1.206900 0.6086616  339      0.9941349
## 6     ZonationSPP_ADMU       10 1.203360 0.6068403  341      1.0000000
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA        0.000000
## 2 1.0000000   1.0000000        0.000000
## 3 0.7151735   0.8964859       16.970563
## 4 0.9800000   1.0000000        2.236068
## 5 0.9989305   1.0000000        2.000000
## 6 1.0000000   1.0000000        0.000000
## [1] "Physalis ixocarpa"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       43 2.842277 0.9259157 122497      1.0000000
## 2          ZonationSPP       39 2.645907 0.9050735  28601      0.2334833
## 3           ZonationZV       37 2.685304 0.9036650  29480      0.2406590
## 4      ZonationProxiDG       38 2.802823 0.9248131  20017      0.1634081
## 5 ZonationProxiDGvsSPP       43 3.231307 0.9528872  23086      0.1884618
## 6     ZonationSPP_ADMU       39 2.608392 0.8946176  27784      0.2268137
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4215381   0.2500000        27631.30
## 3 0.4629824   0.3075765        27244.74
## 4 0.5028069   0.4238683        30368.53
## 5 0.6511034   0.8851413        29711.84
## 6 0.3316950   0.1428571        26788.78
## [1] "Physalis lagascae"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson    Area Prop_to_AreaSP
## 1               ENM_sp       83 3.505410 0.9521138 1148441     1.00000000
## 2          ZonationSPP       76 3.543584 0.9579253  134256     0.11690283
## 3           ZonationZV       77 3.530246 0.9588895  108899     0.09482333
## 4      ZonationProxiDG       80 4.038593 0.9805639  118108     0.10284203
## 5 ZonationProxiDGvsSPP       83 4.056725 0.9799021  138617     0.12070015
## 6     ZonationSPP_ADMU       80 3.501698 0.9542191  116462     0.10140878
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2648141   0.1241808        234114.2
## 3 0.3054723   0.1200105        239345.5
## 4 0.3781904   0.1983936        241162.4
## 5 0.4502310   0.3231549        236506.2
## 6 0.1573705   0.1000170        227420.2
## [1] "Physalis leptophylla"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       62 3.153738 0.9386132 435784     1.00000000
## 2          ZonationSPP       54 2.741713 0.8873756  50234     0.11527270
## 3           ZonationZV       53 2.745877 0.9011439  43088     0.09887467
## 4      ZonationProxiDG       51 3.312810 0.9592421  55379     0.12707901
## 5 ZonationProxiDGvsSPP       62 3.656752 0.9698055  64248     0.14743084
## 6     ZonationSPP_ADMU       61 3.202461 0.9414342  38217     0.08769712
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1719556  0.07887413        95748.34
## 3 0.1808001  0.03870866        98932.65
## 4 0.2332292  0.08608698       100287.36
## 5 0.5657820  0.52243257        99504.39
## 6 0.2258160  0.10315482        99064.27
## [1] "Physalis melanocystis"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       63 3.478986 0.9615332 337169      1.0000000
## 2          ZonationSPP       58 3.154309 0.9389948  51999      0.1542224
## 3           ZonationZV       55 2.990934 0.9349644  47209      0.1400158
## 4      ZonationProxiDG       54 3.526030 0.9669428  53727      0.1593474
## 5 ZonationProxiDGvsSPP       63 3.780971 0.9736092  54120      0.1605130
## 6     ZonationSPP_ADMU       62 3.313657 0.9437572  48690      0.1444083
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2715027   0.1597152        56928.61
## 3 0.2526017   0.1017294        58402.05
## 4 0.3278260   0.1960746        59648.59
## 5 0.5085264   0.3490655        58840.99
## 6 0.2375710   0.1250000        56457.34
## [1] "Physalis minuta"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       42 3.122271 0.9431651 145721     1.00000000
## 2          ZonationSPP       35 2.658053 0.8960053  16107     0.11053314
## 3           ZonationZV       31 2.368161 0.8537371   7141     0.04900460
## 4      ZonationProxiDG       31 2.767593 0.9227767  24103     0.16540512
## 5 ZonationProxiDGvsSPP       42 3.436018 0.9630755  28030     0.19235388
## 6     ZonationSPP_ADMU       41 2.937762 0.9109982  13963     0.09582009
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1911845 0.078213389        31827.08
## 3 0.1081783 0.005701335        33852.18
## 4 0.2341784 0.075188308        31156.27
## 5 0.5163112 0.371472160        30299.58
## 6 0.2239075 0.114945660        31072.43
## [1] "Physalis nicandroides"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       76 3.473756 0.9515301 595992      1.0000000
## 2          ZonationSPP       67 3.282820 0.9401362  94583      0.1586984
## 3           ZonationZV       62 3.288143 0.9441655  75866      0.1272937
## 4      ZonationProxiDG       69 3.813400 0.9751171  82944      0.1391697
## 5 ZonationProxiDGvsSPP       76 3.903655 0.9766830 101426      0.1701801
## 6     ZonationSPP_ADMU       76 3.487838 0.9544501  62917      0.1055669
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2802582   0.1261734        113703.5
## 3 0.2905193   0.1104372        118187.3
## 4 0.3729131   0.2432566        123262.4
## 5 0.5193772   0.4118858        118711.6
## 6 0.2119012   0.1049150        118824.2
## [1] "Physalis orizabae"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       78 3.141041 0.9262123 398763      1.0000000
## 2          ZonationSPP       69 3.252985 0.9412005  82857      0.2077851
## 3           ZonationZV       67 3.243917 0.9409341  63602      0.1594982
## 4      ZonationProxiDG       72 3.696863 0.9702428  65200      0.1635056
## 5 ZonationProxiDGvsSPP       78 3.835896 0.9729656  75904      0.1903487
## 6     ZonationSPP_ADMU       77 3.238072 0.9375666  48717      0.1221703
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3363426   0.2767685        93517.88
## 3 0.3740646   0.2001077        97200.63
## 4 0.4567494   0.3254410       101446.53
## 5 0.6289375   0.6213670        98799.43
## 6 0.2338747   0.1214842        97122.97
## [1] "Physalis patula"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson    Area Prop_to_AreaSP
## 1               ENM_sp       82 3.465712 0.9482313 1397995     1.00000000
## 2          ZonationSPP       77 3.657302 0.9637779  153875     0.11006835
## 3           ZonationZV       75 3.631952 0.9623461  121163     0.08666912
## 4      ZonationProxiDG       77 4.140520 0.9830229  145994     0.10443099
## 5 ZonationProxiDGvsSPP       82 4.129721 0.9816388  159283     0.11393675
## 6     ZonationSPP_ADMU       80 3.525150 0.9549836  143578     0.10270280
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2589834   0.1452652        301515.2
## 3 0.2994149   0.1499598        305473.0
## 4 0.4058605   0.2587965        307307.9
## 5 0.4180481   0.2794852        302558.0
## 6 0.1309470   0.1000381        289360.0
## [1] "Physalis philadelphica"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       97 3.727412 0.9611199 904023     1.00000000
## 2          ZonationSPP       86 3.701432 0.9629227 142325     0.15743515
## 3           ZonationZV       88 3.743617 0.9657670 114396     0.12654103
## 4      ZonationProxiDG       92 4.187257 0.9835194 136718     0.15123288
## 5 ZonationProxiDGvsSPP       97 4.215717 0.9828007 144711     0.16007447
## 6     ZonationSPP_ADMU       93 3.757288 0.9639998  88887     0.09832383
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2848685  0.14935407        159506.6
## 3 0.3536596  0.17176378        164601.1
## 4 0.4537558  0.31382979        167878.1
## 5 0.4902015  0.35416297        163581.1
## 6 0.1494158  0.09904578        162652.1
## [1] "Physalis pruinosa"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson    Area Prop_to_AreaSP
## 1               ENM_sp       86 3.656444 0.9595051 1352156     1.00000000
## 2          ZonationSPP       80 3.639146 0.9616306  133189     0.09850121
## 3           ZonationZV       81 3.579866 0.9611077  119307     0.08823464
## 4      ZonationProxiDG       83 4.134369 0.9824945  134396     0.09939386
## 5 ZonationProxiDGvsSPP       86 4.181455 0.9828699  150565     0.11135180
## 6     ZonationSPP_ADMU       84 3.721651 0.9652966  126655     0.09366893
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2392128   0.1290502        258642.7
## 3 0.2994042   0.1344599        262159.2
## 4 0.3840239   0.2082586        261796.1
## 5 0.3903968   0.2559880        258505.0
## 6 0.1168084   0.1000698        249257.7
## [1] "Physalis pubescens"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson    Area Prop_to_AreaSP
## 1               ENM_sp      101 3.844578 0.9665952 1785127      1.0000000
## 2          ZonationSPP       99 3.983293 0.9750127  198989      0.1114705
## 3           ZonationZV       97 3.845949 0.9716374  195992      0.1097916
## 4      ZonationProxiDG      100 4.392795 0.9868339  185725      0.1040402
## 5 ZonationProxiDGvsSPP      101 4.391633 0.9862956  202808      0.1136098
## 6     ZonationSPP_ADMU      100 3.899952 0.9698182  184440      0.1033204
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2821266   0.1540188        308124.3
## 3 0.3276559   0.1536418        310982.0
## 4 0.4233970   0.2266546        313932.4
## 5 0.3969955   0.2672446        309234.2
## 6 0.1307179   0.1002571        295396.8
## [1] "Physalis solanaceus"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       78 3.048659 0.9315443 832109     1.00000000
## 2          ZonationSPP       71 3.328936 0.9488220  95717     0.11502940
## 3           ZonationZV       68 3.304642 0.9470454  80940     0.09727091
## 4      ZonationProxiDG       69 3.698901 0.9699231  53559     0.06436537
## 5 ZonationProxiDGvsSPP       78 3.830518 0.9716194  84297     0.10130524
## 6     ZonationSPP_ADMU       76 3.096109 0.9301322 108008     0.12980030
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3158810   0.1923185        202544.9
## 3 0.3385538   0.1735232        204715.2
## 4 0.3326111   0.1510023        211583.3
## 5 0.5735820   0.6200335        205880.7
## 6 0.2591929   0.1372639        191545.0
## [1] "Physalis sordida"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       67 3.098466 0.9297354 660887     1.00000000
## 2          ZonationSPP       58 3.152893 0.9370544  91535     0.13850325
## 3           ZonationZV       60 3.014733 0.9292236  71348     0.10795794
## 4      ZonationProxiDG       60 3.564010 0.9677475  64768     0.09800163
## 5 ZonationProxiDGvsSPP       67 3.791190 0.9724704  79116     0.11971184
## 6     ZonationSPP_ADMU       65 3.016424 0.9230391  81122     0.12274716
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2599845   0.1406083        160889.5
## 3 0.2700365   0.1271233        162466.8
## 4 0.3609121   0.2000000        167868.8
## 5 0.5196274   0.4401244        165255.4
## 6 0.1919522   0.1001590        153960.6
## [1] "Physalis sulphurea"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       54 2.790351 0.9080823 238323      1.0000000
## 2          ZonationSPP       46 2.586994 0.8844709  44712      0.1876109
## 3           ZonationZV       41 2.500312 0.8778023  34841      0.1461924
## 4      ZonationProxiDG       46 3.101013 0.9442791  28461      0.1194220
## 5 ZonationProxiDGvsSPP       54 3.381135 0.9576629  38782      0.1627287
## 6     ZonationSPP_ADMU       53 2.761987 0.9096028  26795      0.1124314
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2824962  0.13083495        59768.18
## 3 0.2695419  0.06768965        62521.44
## 4 0.3412237  0.15701243        68253.42
## 5 0.6187359  0.68844365        65979.32
## 6 0.2597191  0.11008478        64958.07
## [1] "Physalis virginiana"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       73 2.894052 0.9136809 942152     1.00000000
## 2          ZonationSPP       64 3.275640 0.9501840 102044     0.10830949
## 3           ZonationZV       67 3.321610 0.9505364  90120     0.09565336
## 4      ZonationProxiDG       69 3.647078 0.9700821  72545     0.07699925
## 5 ZonationProxiDGvsSPP       73 3.759164 0.9704459  89561     0.09506003
## 6     ZonationSPP_ADMU       71 2.936189 0.9176298  98921     0.10499474
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3338733   0.2547033        265281.9
## 3 0.3849961   0.2248354        266926.8
## 4 0.3988375   0.2395919        269317.3
## 5 0.5724531   0.5454545        264801.5
## 6 0.2237510   0.1124065        250379.2
## [1] "Physalis volubilis"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       55 2.970157 0.9267991 167596      1.0000000
## 2          ZonationSPP       52 2.751888 0.9107442  51407      0.3067317
## 3           ZonationZV       47 2.621507 0.8997765  34808      0.2076899
## 4      ZonationProxiDG       52 3.107311 0.9433411  34177      0.2039249
## 5 ZonationProxiDGvsSPP       55 3.406276 0.9581062  41518      0.2477267
## 6     ZonationSPP_ADMU       52 2.937955 0.9228137  21576      0.1287382
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4009679   0.2873887        32618.34
## 3 0.3175100   0.1104518        37790.71
## 4 0.4488184   0.3169014        40564.68
## 5 0.6747052   0.7804428        38802.46
## 6 0.2421900   0.1274434        39527.64
## [1] "Physalis waterfallii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       47 2.807716 0.9184674 133024      1.0000000
## 2          ZonationSPP       45 2.760311 0.9190042  39878      0.2997805
## 3           ZonationZV       41 2.646822 0.9062432  31564      0.2372805
## 4      ZonationProxiDG       39 2.912410 0.9326721  29417      0.2211405
## 5 ZonationProxiDGvsSPP       47 3.270153 0.9527963  33873      0.2546383
## 6     ZonationSPP_ADMU       45 2.939452 0.9255980  13479      0.1013276
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3829442   0.3254818        30010.71
## 3 0.3046085   0.1612380        31473.09
## 4 0.3900471   0.2304318        33120.29
## 5 0.7125212   0.9159420        31938.35
## 6 0.2636786   0.1144068        34474.86
## [1] "Solanum agrimonifolium"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning in `[<-.factor`(`*tmp*`, list, value = 0): invalid factor level, NA
## generated

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp        9 1.057363 0.5111268 6770      1.0000000
## 2          ZonationSPP        9 1.000209 0.4820185 6499      0.9599705
## 3           ZonationZV        9 1.057363 0.5111268 6770      1.0000000
## 4      ZonationProxiDG        9 1.164787 0.5433658 4053      0.5986706
## 5 ZonationProxiDGvsSPP        9 1.391910 0.6439849 2921      0.4314623
## 6     ZonationSPP_ADMU        9 1.409737 0.7053841 1427      0.2107829
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA          0.0000
## 2 0.8668002   0.9230769        152.3122
## 3 1.0000000   1.0000000          0.0000
## 4 0.8205808   1.0000000       2025.3437
## 5 0.8238686   1.0000000       3018.3414
## 6 0.3780034   0.2691606       4098.3242
## [1] "Solanum bulbocastanum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       52 2.895931 0.9203294 255385     1.00000000
## 2          ZonationSPP       44 2.813786 0.9145507  59302     0.23220628
## 3           ZonationZV       46 2.748880 0.9073250  46358     0.18152202
## 4      ZonationProxiDG       47 3.256014 0.9559018  48251     0.18893435
## 5 ZonationProxiDGvsSPP       52 3.383358 0.9599595  54560     0.21363823
## 6     ZonationSPP_ADMU       51 2.967228 0.9269684  24243     0.09492727
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3615773   0.2545251        58899.20
## 3 0.3614877   0.2142587        61659.12
## 4 0.4624091   0.3705459        65697.13
## 5 0.6646239   0.8231075        63771.30
## 6 0.2375958   0.1000987        65747.99
## [1] "Solanum cardiophyllum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       40 2.667189 0.9032222 177407     1.00000000
## 2          ZonationSPP       32 2.515864 0.8846169  35367     0.19935516
## 3           ZonationZV       33 2.402439 0.8746636  27776     0.15656654
## 4      ZonationProxiDG       35 2.862786 0.9323172  29462     0.16607011
## 5 ZonationProxiDGvsSPP       40 3.145433 0.9470430  35331     0.19915223
## 6     ZonationSPP_ADMU       36 2.616548 0.9055857  17001     0.09583049
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3013419   0.1779444        46619.35
## 3 0.2960243   0.1069763        48433.91
## 4 0.4367225   0.3299410        50134.75
## 5 0.6299695   0.6552435        48292.65
## 6 0.1963001   0.0805260        50342.81
## [1] "Solanum clarum"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning in `[<-.factor`(`*tmp*`, list, value = 0): invalid factor level, NA
## generated

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness   shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp        2 0.5945425 0.4046816  142      1.0000000
## 2          ZonationSPP        2 0.5945425 0.4046816  142      1.0000000
## 3           ZonationZV        2 0.5945425 0.4046816  142      1.0000000
## 4      ZonationProxiDG        2 0.5945425 0.4046816  142      1.0000000
## 5 ZonationProxiDGvsSPP        2 0.5964028 0.4064182  141      0.9929577
## 6     ZonationSPP_ADMU        2 0.2432671 0.1233535  106      0.7464789
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA         0.00000
## 2 1.0000000   1.0000000         0.00000
## 3 1.0000000   1.0000000         0.00000
## 4 1.0000000   1.0000000         0.00000
## 5 0.9950980   0.9950980         1.00000
## 6 0.5727941   0.5727941        33.13608
## [1] "Solanum demissum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       41 2.716627 0.9041761 75146      1.0000000
## 2          ZonationSPP       37 2.651881 0.9091928 25484      0.3391265
## 3           ZonationZV       34 2.644628 0.9030586 21625      0.2877731
## 4      ZonationProxiDG       37 2.852689 0.9237084 21818      0.2903415
## 5 ZonationProxiDGvsSPP       41 3.212925 0.9516758 20913      0.2782982
## 6     ZonationSPP_ADMU       38 2.554527 0.8694884  8671      0.1153887
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4777179   0.4380398        17867.17
## 3 0.4739313   0.2830189        18932.10
## 4 0.5163942   0.5131553        19806.09
## 5 0.7205135   0.9229122        19732.26
## 6 0.2220472   0.1052632        20799.90
## [1] "Solanum ehrenbergii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       20 1.892565 0.8185686 155212     1.00000000
## 2          ZonationSPP       19 1.900733 0.7885829  22365     0.14409324
## 3           ZonationZV       17 1.913213 0.7883520  14363     0.09253795
## 4      ZonationProxiDG       16 1.903265 0.7933212   5606     0.03611834
## 5 ZonationProxiDGvsSPP       20 2.465209 0.8988849  15176     0.09777595
## 6     ZonationSPP_ADMU       19 2.099357 0.8523831  16999     0.10952117
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.2958570  0.26233027        59014.34
## 3 0.2355543  0.15871005        61711.08
## 4 0.2316873  0.05282762        64809.18
## 5 0.6122083  0.70862542        62148.55
## 6 0.3315588  0.15424616        61419.92
## [1] "Solanum endiense"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       23 2.386588 0.8841957 30525     1.00000000
## 2          ZonationSPP       22 2.309690 0.8725485 15101     0.49470925
## 3           ZonationZV       22 2.263321 0.8622362 12904     0.42273546
## 4      ZonationProxiDG       21 2.327849 0.8650801 12720     0.41670762
## 5 ZonationProxiDGvsSPP       23 2.693112 0.9210672 11909     0.39013923
## 6     ZonationSPP_ADMU       22 2.560253 0.9071083  2513     0.08232596
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.6605866   0.8047035        6600.334
## 3 0.5811393   0.7048458        7540.775
## 4 0.5638008   0.6666667        8020.490
## 5 0.7612965   0.9521277        7772.886
## 6 0.2546702   0.1052632        9687.876
## [1] "Solanum hjertingii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       24 1.983136 0.8142907 131818     1.00000000
## 2          ZonationSPP       22 1.769016 0.7478454  12505     0.09486565
## 3           ZonationZV       19 1.532524 0.6153837  11577     0.08782564
## 4      ZonationProxiDG       19 1.842831 0.7700137   6527     0.04951524
## 5 ZonationProxiDGvsSPP       24 2.630407 0.9142722  12976     0.09843876
## 6     ZonationSPP_ADMU       24 1.766248 0.7430061  34550     0.26210381
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3377097  0.11146244        52791.90
## 3 0.2892970  0.07545022        52026.81
## 4 0.2730073  0.05289662        55613.28
## 5 0.6213053  0.89842940        54038.50
## 6 0.4089636  0.30062778        41901.84
## [1] "Solanum hougasii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       42 2.561879 0.8906831 32916      1.0000000
## 2          ZonationSPP       33 2.246340 0.8403528 16326      0.4959898
## 3           ZonationZV       28 1.963906 0.7904047 12840      0.3900838
## 4      ZonationProxiDG       39 2.509226 0.8917663 14058      0.4270871
## 5 ZonationProxiDGvsSPP       42 2.952902 0.9295018 13480      0.4095273
## 6     ZonationSPP_ADMU       40 2.644349 0.9052264  5315      0.1614716
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.4129193  0.37899262        5530.504
## 3 0.2939733  0.08057739        6580.417
## 4 0.5305350  0.50779037        6869.766
## 5 0.8387422  1.00000000        7679.951
## 6 0.3193088  0.22698300        9475.605
## [1] "Solanum iopetalum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       74 3.520583 0.9574027 625697      1.0000000
## 2          ZonationSPP       67 3.368402 0.9526880 108823      0.1739228
## 3           ZonationZV       64 3.347525 0.9490911  84661      0.1353067
## 4      ZonationProxiDG       66 3.879796 0.9774429 101353      0.1619842
## 5 ZonationProxiDGvsSPP       74 3.943345 0.9781016 119581      0.1911165
## 6     ZonationSPP_ADMU       72 3.437075 0.9534673  74649      0.1193054
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.2834558   0.1056404        110994.8
## 3 0.3091095   0.1311796        115108.1
## 4 0.4455866   0.2899929        119133.3
## 5 0.5324936   0.4404880        114954.7
## 6 0.1931110   0.1041542        113849.4
## [1] "Solanum morelliforme"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       67 3.405476 0.9563704 224787      1.0000000
## 2          ZonationSPP       62 3.287403 0.9511790  72632      0.3231148
## 3           ZonationZV       60 3.257793 0.9474533  54821      0.2438798
## 4      ZonationProxiDG       61 3.577201 0.9671095  58152      0.2586982
## 5 ZonationProxiDGvsSPP       67 3.737183 0.9718922  64226      0.2857194
## 6     ZonationSPP_ADMU       66 3.431826 0.9582087  34098      0.1516903
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3931267   0.3618162        35661.46
## 3 0.3815298   0.2128703        39155.03
## 4 0.4955559   0.3865954        39769.54
## 5 0.6577951   0.7232290        37737.95
## 6 0.2555170   0.1313444        40938.41
## [1] "Solanum oxycarpum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       57 3.120579 0.9403663 113122      1.0000000
## 2          ZonationSPP       51 3.121597 0.9448765  32034      0.2831810
## 3           ZonationZV       49 3.021003 0.9329900  26581      0.2349764
## 4      ZonationProxiDG       50 3.141970 0.9481371  36583      0.3233942
## 5 ZonationProxiDGvsSPP       57 3.418139 0.9591911  35173      0.3109298
## 6     ZonationSPP_ADMU       55 3.002490 0.9317062  14845      0.1312300
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4178544   0.3596661        22612.19
## 3 0.4259462   0.3317850        24117.20
## 4 0.5034059   0.3958293        21636.61
## 5 0.7017588   0.9245902        21462.00
## 6 0.2885599   0.1199206        24180.30
## [1] "Solanum pinnatisectum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       26 1.889198 0.7899732 71051     1.00000000
## 2          ZonationSPP       24 1.673820 0.7151927 16839     0.23699878
## 3           ZonationZV       17 1.424646 0.6275403 11642     0.16385413
## 4      ZonationProxiDG       20 1.869874 0.7615327  5225     0.07353873
## 5 ZonationProxiDGvsSPP       26 2.541803 0.8967744  9828     0.13832318
## 6     ZonationSPP_ADMU       25 2.253343 0.8612029  8962     0.12613475
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4043657  0.32832435        25050.91
## 3 0.2651696  0.05443078        26526.48
## 4 0.3392043  0.12387198        31346.53
## 5 0.7234363  1.00000000        29965.15
## 6 0.4327556  0.26533692        29461.69
## [1] "Solanum polyadenium"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       42 2.753485 0.9055644 141071     1.00000000
## 2          ZonationSPP       40 2.771399 0.9125973  35904     0.25451014
## 3           ZonationZV       39 2.637865 0.8912130  27120     0.19224362
## 4      ZonationProxiDG       40 3.086840 0.9474208  35802     0.25378710
## 5 ZonationProxiDGvsSPP       42 3.240832 0.9527411  34009     0.24107719
## 6     ZonationSPP_ADMU       41 2.873858 0.9187045  13537     0.09595877
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4221162   0.3528161        36151.77
## 3 0.3753991   0.1801948        37581.43
## 4 0.5589425   0.4512204        37891.21
## 5 0.6542855   0.7227213        37468.72
## 6 0.2260435   0.1056839        39572.67
## [1] "Solanum schenckii"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       57 3.120579 0.9403663 113122      1.0000000
## 2          ZonationSPP       51 3.121597 0.9448765  32034      0.2831810
## 3           ZonationZV       49 3.021003 0.9329900  26581      0.2349764
## 4      ZonationProxiDG       50 3.141970 0.9481371  36583      0.3233942
## 5 ZonationProxiDGvsSPP       57 3.418139 0.9591911  35173      0.3109298
## 6     ZonationSPP_ADMU       55 3.002490 0.9317062  14845      0.1312300
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4178544   0.3596661        22612.19
## 3 0.4259462   0.3317850        24117.20
## 4 0.5034059   0.3958293        21636.61
## 5 0.7017588   0.9245902        21462.00
## 6 0.2885599   0.1199206        24180.30
## [1] "Solanum stenophyllidium"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       38 2.531380 0.8740448 410338     1.00000000
## 2          ZonationSPP       37 2.748226 0.9010085  59609     0.14526805
## 3           ZonationZV       34 2.665782 0.8998292  42023     0.10241070
## 4      ZonationProxiDG       34 3.069882 0.9438150  29074     0.07085378
## 5 ZonationProxiDGvsSPP       38 3.288737 0.9544297  46054     0.11223430
## 6     ZonationSPP_ADMU       38 2.899663 0.9148814  38808     0.09457569
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.3195993   0.2389171        134967.9
## 3 0.2919286   0.1360328        138741.1
## 4 0.2686494   0.1118076        142067.6
## 5 0.4765736   0.3883503        138338.4
## 6 0.2507216   0.1383266        134996.3
## [1] "Solanum stoloniferum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       64 2.859737 0.9039178 423750     1.00000000
## 2          ZonationSPP       59 3.213948 0.9441828  74180     0.17505605
## 3           ZonationZV       57 3.083438 0.9353553  61408     0.14491563
## 4      ZonationProxiDG       61 3.482606 0.9642901  61693     0.14558820
## 5 ZonationProxiDGvsSPP       64 3.610555 0.9658285  67792     0.15998112
## 6     ZonationSPP_ADMU       61 2.950833 0.8995954  39494     0.09320118
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.4126395   0.3286560        118946.0
## 3 0.4207277   0.2456271        121368.0
## 4 0.5084453   0.3824306        124974.2
## 5 0.6480002   0.7448937        121635.4
## 6 0.2050519   0.1028464        119249.9
## [1] "Solanum trifidum"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       20 1.626306 0.7055233 12979      1.0000000
## 2          ZonationSPP       20 1.557363 0.6841304 10722      0.8261037
## 3           ZonationZV       19 1.505558 0.6653134 10807      0.8326527
## 4      ZonationProxiDG       16 1.437178 0.7156430  4415      0.3401649
## 5 ZonationProxiDGvsSPP       20 2.067924 0.8333141  5264      0.4055782
## 6     ZonationSPP_ADMU       20 2.072197 0.8338334  2336      0.1799830
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.7910024   0.8635383        1073.304
## 3 0.7270250   0.8214039         924.475
## 4 0.4445383   0.2930125        5075.210
## 5 0.8595371   1.0000000        5041.791
## 6 0.5414972   0.5263158        6171.470
## [1] "Solanum verrucosum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       50 2.963146 0.9239265 153449      1.0000000
## 2          ZonationSPP       47 3.032051 0.9375850  44562      0.2904027
## 3           ZonationZV       44 2.890664 0.9214474  32635      0.2126765
## 4      ZonationProxiDG       46 3.221770 0.9539480  41909      0.2731135
## 5 ZonationProxiDGvsSPP       50 3.423340 0.9609211  40664      0.2650001
## 6     ZonationSPP_ADMU       49 3.142950 0.9394720  16423      0.1070258
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4335923   0.3606979        35261.93
## 3 0.3754678   0.1752090        37358.90
## 4 0.4893495   0.3804306        37370.57
## 5 0.6796312   0.8142676        35849.87
## 6 0.2597468   0.1236304        38593.78
## [1] "Tripsacum lanceolatum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       29 2.399457 0.8839525 487983     1.00000000
## 2          ZonationSPP       25 2.440979 0.8926751  40642     0.08328569
## 3           ZonationZV       23 2.475604 0.8855269  35271     0.07227916
## 4      ZonationProxiDG       25 2.747578 0.9255746  28388     0.05817416
## 5 ZonationProxiDGvsSPP       29 2.894542 0.9339884  38432     0.07875684
## 6     ZonationSPP_ADMU       27 2.303420 0.8657728  55960     0.11467613
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA             0.0
## 2 0.1274509  0.08000000        154167.6
## 3 0.1752670  0.04299065        158159.9
## 4 0.2462404  0.08908507        159868.4
## 5 0.4668094  0.26913403        157438.0
## 6 0.1656024  0.10001567        146781.7
## [1] "Tripsacum lolium"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       30 2.390241 0.8636495 58905      1.0000000
## 2          ZonationSPP       29 2.586499 0.9049385 16504      0.2801800
## 3           ZonationZV       25 2.171586 0.8063723 20074      0.3407860
## 4      ZonationProxiDG       23 2.647485 0.9046124 11633      0.1974875
## 5 ZonationProxiDGvsSPP       30 3.033130 0.9399183 13983      0.2373822
## 6     ZonationSPP_ADMU       29 2.560523 0.8897144 12119      0.2057381
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.4820717   0.5140761        18387.41
## 3 0.5041854   0.5076978        14655.10
## 4 0.4208547   0.2570897        18870.21
## 5 0.7033220   1.0000000        18852.07
## 6 0.3279069   0.2188234        18020.16
## [1] "Tripsacum pilosum"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       23 1.237867 0.4932552 59236      1.0000000
## 2          ZonationSPP       19 1.075176 0.4570007 15304      0.2583564
## 3           ZonationZV       15 1.096916 0.4672058 11546      0.1949153
## 4      ZonationProxiDG       18 1.574254 0.7316751  3777      0.0637619
## 5 ZonationProxiDGvsSPP       23 2.773843 0.9283746  7514      0.1268485
## 6     ZonationSPP_ADMU       23 1.585901 0.6115076  8061      0.1360828
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1901713  0.10370370        30919.88
## 3 0.1802272  0.03778338        33785.63
## 4 0.1226471  0.04347826        40611.98
## 5 0.7838488  0.95454545        40955.20
## 6 0.3747245  0.23776224        37180.96
## [1] "Vanilla odorata"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       39 2.687295 0.9065409 260397      1.0000000
## 2          ZonationSPP       38 2.698062 0.9111430  35487      0.1362804
## 3           ZonationZV       36 2.469518 0.8793259  46569      0.1788385
## 4      ZonationProxiDG       37 3.078601 0.9468256  39610      0.1521139
## 5 ZonationProxiDGvsSPP       39 3.205604 0.9524349  35331      0.1356813
## 6     ZonationSPP_ADMU       37 2.695769 0.9120130  27689      0.1063338
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.3244239   0.2014134        73852.19
## 3 0.4794115   0.4097289        70464.33
## 4 0.5669558   0.5819996        74305.04
## 5 0.5680682   0.4296546        73825.83
## 6 0.1614414   0.1002571        71516.24
## [1] "Vanilla pompona"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       65 3.398393 0.9558519 352684      1.0000000
## 2          ZonationSPP       57 3.088509 0.9339249  46170      0.1309104
## 3           ZonationZV       49 2.729682 0.8905552  41213      0.1168553
## 4      ZonationProxiDG       57 3.585752 0.9674999  62284      0.1766000
## 5 ZonationProxiDGvsSPP       65 3.764570 0.9720099  68889      0.1953278
## 6     ZonationSPP_ADMU       61 3.270494 0.9489448  36813      0.1043796
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1729398  0.08117099        66119.87
## 3 0.2205343  0.02128477        67014.78
## 4 0.3989094  0.26957494        66387.68
## 5 0.5530598  0.44746647        64601.05
## 6 0.1233682  0.10144928        66447.57
## [1] "Zea diploperennis"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp       11 1.740161 0.7973727 5209      1.0000000
## 2          ZonationSPP       11 1.738539 0.7967795 5194      0.9971204
## 3           ZonationZV       11 1.740161 0.7973727 5209      1.0000000
## 4      ZonationProxiDG        9 1.567675 0.7359125 2860      0.5490497
## 5 ZonationProxiDGvsSPP       11 1.896909 0.8407423 2891      0.5550010
## 6     ZonationSPP_ADMU       11 1.635522 0.7656157 3674      0.7053177
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.9974174   1.0000000          15.000
## 3 1.0000000   1.0000000           0.000
## 4 0.5040266   0.3333333        1185.850
## 5 0.8162662   1.0000000        1302.132
## 6 0.7739102   1.0000000         905.422
## [1] "Zea luxurians"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp       11 1.658002 0.7402961 4128      1.0000000
## 2          ZonationSPP       11 1.486063 0.6908849 3039      0.7361919
## 3           ZonationZV       11 1.658002 0.7402961 4128      1.0000000
## 4      ZonationProxiDG       10 1.661189 0.7670160 1908      0.4622093
## 5 ZonationProxiDGvsSPP       11 2.005915 0.8463959 1898      0.4597868
## 6     ZonationSPP_ADMU       11 1.404470 0.6527060 2980      0.7218992
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA          0.0000
## 2 0.6944832   0.8204593        517.7828
## 3 1.0000000   1.0000000          0.0000
## 4 0.6358291   0.7866109       1258.5762
## 5 0.7835687   0.8901099       1447.8349
## 6 0.6205418   0.7594937        576.3280
## [1] "Zea mays huehuetenango"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning in `[<-.factor`(`*tmp*`, list, value = 0): invalid factor level, NA
## generated

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp        1 1.791759 0.8333333   30              1
## 2          ZonationSPP        1 1.791759 0.8333333   30              1
## 3           ZonationZV        1 1.791759 0.8333333   30              1
## 4      ZonationProxiDG        1 1.791759 0.8333333   30              1
## 5 ZonationProxiDGvsSPP        1 1.791759 0.8333333   30              1
## 6     ZonationSPP_ADMU        1 1.791759 0.8333333   30              1
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA               0
## 2         1           1               0
## 3         1           1               0
## 4         1           1               0
## 5         1           1               0
## 6         1           1               0
## [1] "Zea mays mexicana race chalco"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       16 1.796393 0.7727278 29313      1.0000000
## 2          ZonationSPP       16 1.893711 0.8210462 12776      0.4358476
## 3           ZonationZV       14 1.902894 0.8159353 11639      0.3970593
## 4      ZonationProxiDG       13 1.942758 0.8421079  8440      0.2879269
## 5 ZonationProxiDGvsSPP       16 2.235072 0.8674899  6747      0.2301709
## 6     ZonationSPP_ADMU       15 1.900222 0.7834097  4953      0.1689694
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.5353645   0.5358055        9103.326
## 3 0.5654068   0.4906649        9432.490
## 4 0.4750734   0.3349372       11534.034
## 5 0.6711319   0.7943811       12240.781
## 6 0.4101092   0.1823081       11750.515
## [1] "Zea mays mexicana race durango"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp       11 1.377412 0.6852968 5916      1.0000000
## 2          ZonationSPP       11 1.377412 0.6852968 5916      1.0000000
## 3           ZonationZV       11 1.377412 0.6852968 5916      1.0000000
## 4      ZonationProxiDG        9 1.289958 0.6760784 2949      0.4984787
## 5 ZonationProxiDGvsSPP       11 1.724864 0.7940760 1859      0.3142326
## 6     ZonationSPP_ADMU       11 1.377412 0.6852968 5916      1.0000000
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 1.0000000   1.0000000           0.000
## 3 1.0000000   1.0000000           0.000
## 4 0.4934707   0.4462575        1933.384
## 5 0.7785520   1.0000000        2619.920
## 6 1.0000000   1.0000000           0.000
## [1] "Zea mays mexicana race mesa central"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness   shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp        8 1.0718451 0.5516889 25070      1.0000000
## 2          ZonationSPP        8 0.9646295 0.5684022 12667      0.5052653
## 3           ZonationZV        8 1.0117502 0.5430805 11634      0.4640606
## 4      ZonationProxiDG        5 0.7940207 0.4313034  2946      0.1175110
## 5 ZonationProxiDGvsSPP        8 1.6746421 0.7492235  3803      0.1516953
## 6     ZonationSPP_ADMU        8 1.5477797 0.7329374  4434      0.1768648
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 0.3434767   0.2568139        8751.553
## 3 0.4037497   0.3925552        8998.174
## 4 0.2035213   0.1679049       15974.888
## 5 0.6109987   0.5787860       15661.150
## 6 0.5856070   0.6232602       14910.841
## [1] "Zea mays mexicana race nobogame"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp       10 1.643579 0.7421844 6478      1.0000000
## 2          ZonationSPP       10 1.643579 0.7421844 6478      1.0000000
## 3           ZonationZV       10 1.643579 0.7421844 6478      1.0000000
## 4      ZonationProxiDG        8 1.614699 0.7396879 3024      0.4668107
## 5 ZonationProxiDGvsSPP       10 2.025050 0.8583957 2597      0.4008953
## 6     ZonationSPP_ADMU       10 1.593577 0.7292426 6298      0.9722136
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA           0.000
## 2 1.0000000   1.0000000           0.000
## 3 1.0000000   1.0000000           0.000
## 4 0.4864589   0.4135016        1861.559
## 5 0.7582636   1.0000000        2510.213
## 6 0.9421222   1.0000000         180.000
## [1] "Zea mays parviglumis"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness  shannon   simpson  Area Prop_to_AreaSP
## 1               ENM_sp       28 2.396557 0.8596622 97795      1.0000000
## 2          ZonationSPP       21 1.929267 0.7619650 18212      0.1862263
## 3           ZonationZV       20 2.054828 0.8368529 10611      0.1085025
## 4      ZonationProxiDG       21 2.539778 0.9073261 20615      0.2107981
## 5 ZonationProxiDGvsSPP       28 2.861619 0.9307636 22104      0.2260238
## 6     ZonationSPP_ADMU       26 2.304792 0.8605150 12891      0.1318166
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA            0.00
## 2 0.1333408  0.07903476        28406.32
## 3 0.1204571  0.01475813        33523.39
## 4 0.2854704  0.19609541        32033.15
## 5 0.5942399  0.63641397        31550.16
## 6 0.2090813  0.15168930        32057.81
## [1] "Zea perennis"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining factors with different levels,
## coercing to character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector
## Joining, by = "ProxiDivGen"
## Warning: Column `ProxiDivGen` joining character vector and factor, coercing
## into character vector

## Warning: Column `Solution` joining factor and character vector, coercing
## into character vector

## Warning: Column `Solution` joining character vector and factor, coercing
## into character vector

##               Solution Richness   shannon   simpson Area Prop_to_AreaSP
## 1               ENM_sp        8 1.2373179 0.6532934 3731      1.0000000
## 2          ZonationSPP        8 1.2065106 0.6442362 3658      0.9804342
## 3           ZonationZV        8 1.2373179 0.6532934 3731      1.0000000
## 4      ZonationProxiDG        7 0.9435266 0.5595906 2814      0.7542214
## 5 ZonationProxiDGvsSPP        8 1.4974987 0.7429621 1634      0.4379523
## 6     ZonationSPP_ADMU        7 1.0242097 0.5248310 2353      0.6306620
##   mean.prop median.prop Dist.to.Optimun
## 1        NA          NA         0.00000
## 2 0.9327818   0.9989605        57.57604
## 3 1.0000000   1.0000000         0.00000
## 4 0.6220792   0.8694154       469.28989
## 5 0.8026951   1.0000000      1408.82398
## 6 0.5147418   0.4162162       951.56923
##### Analyse results together

head(sol_tidy_spp)
##   ProxiDivGen Solution  Freq                            sp
## 1           1   ENM_sp  1883 Capsicum annuum glabriusculum
## 2          10   ENM_sp  5667 Capsicum annuum glabriusculum
## 3          11   ENM_sp  4190 Capsicum annuum glabriusculum
## 4          12   ENM_sp 15561 Capsicum annuum glabriusculum
## 5          13   ENM_sp  4059 Capsicum annuum glabriusculum
## 6          14   ENM_sp  3108 Capsicum annuum glabriusculum
head(sol_prop_spp)
##   ProxiDivGen ENM_sp    Solution Proportion_ProxiDG
## 1           1   1883 ZonationSPP         0.01593202
## 2          10   5667 ZonationSPP         0.04252691
## 3          11   4190 ZonationSPP         0.09713604
## 4          12  15561 ZonationSPP         0.14394962
## 5          13   4059 ZonationSPP         0.49913772
## 6          14   3108 ZonationSPP         0.40926641
##                              sp
## 1 Capsicum annuum glabriusculum
## 2 Capsicum annuum glabriusculum
## 3 Capsicum annuum glabriusculum
## 4 Capsicum annuum glabriusculum
## 5 Capsicum annuum glabriusculum
## 6 Capsicum annuum glabriusculum
head(sols_summary_spp)
##               Solution Richness  shannon   simpson   Area Prop_to_AreaSP
## 1               ENM_sp       64 3.216956 0.9341559 473887      1.0000000
## 2          ZonationSPP       57 3.183124 0.9426602  57246      0.1208010
## 3           ZonationZV       56 2.977902 0.9277750  61156      0.1290519
## 4      ZonationProxiDG       59 3.601769 0.9690824  70781      0.1493626
## 5 ZonationProxiDGvsSPP       64 3.771706 0.9735631  65715      0.1386723
## 6     ZonationSPP_ADMU       61 3.202893 0.9334670  51178      0.1079962
##   mean.prop median.prop Dist.to.Optimun                            sp
## 1        NA          NA             0.0 Capsicum annuum glabriusculum
## 2 0.2337136  0.10629199        113743.9 Capsicum annuum glabriusculum
## 3 0.2528522  0.09174691        113795.0 Capsicum annuum glabriusculum
## 4 0.3699246  0.20990318        113614.4 Capsicum annuum glabriusculum
## 5 0.5070655  0.36755490        113899.3 Capsicum annuum glabriusculum
## 6 0.1663593  0.10062029        108847.3 Capsicum annuum glabriusculum
# write results
write.csv(sol_tidy_spp, "../data/comparations_output/sol_tidy_spp.txt", row.names=FALSE, quote = FALSE)
write.csv(sol_prop_spp, "../data/comparations_output/sol_prop_spp.txt", row.names=FALSE, quote = FALSE)
write.csv(sols_summary_spp, "../data/comparations_output/sols_summary_spp.txt", row.names=FALSE, quote = FALSE)

### Plots

## Violin plots

# dist to optimun

filter(sols_summary_spp, Solution!="ENM_sp") %>%
       ggplot(., aes(x=Solution, y=Dist.to.Optimun, color=Solution)) + geom_violin() + geom_jitter(size = 0.3) +
       stat_summary(fun.y=mean, geom="point", color="red") +
       theme(axis.text.x = element_blank()) +
       scale_y_continuous(name="Distance to Optimun")

# Simpson

filter(sols_summary_spp, Solution!="ENM_sp") %>%
  ggplot(., aes(x=Solution, y=simpson, color=Solution)) + geom_violin() + geom_jitter(size = 0.3) +
  stat_summary(fun.y=mean, geom="point", color="red") +
  theme(axis.text.x = element_blank()) +
  scale_y_continuous(name="Simpson Index")

# Area sp conserved

filter(sols_summary_spp, Solution!="ENM_sp") %>%
  ggplot(., aes(x=Solution, y=Prop_to_AreaSP, color=Solution)) + geom_violin() + geom_jitter(size = 0.3) +
  stat_summary(fun.y=mean, geom="point", color="red") +
  theme(axis.text.x = element_blank()) +
  scale_y_continuous(name="Proportion of distribution of the sp conserved")

# Mean prop area proxies by sp ponserved

filter(sols_summary_spp, Solution!="ENM_sp") %>%
  ggplot(., aes(x=Solution, y=mean.prop, color=Solution)) + geom_violin() + geom_jitter(size = 0.3) +
  stat_summary(fun.y=mean, geom="point", color="red") +
  theme(axis.text.x = element_blank()) +
  scale_y_continuous(name="Mean proportion of the area of each proxy conserved by sp")

# Median prop area proxies by sp ponserved

filter(sols_summary_spp, Solution!="ENM_sp") %>%
  ggplot(., aes(x=Solution, y=median.prop, color=Solution)) + geom_violin() + geom_jitter(size = 0.3) +
  stat_summary(fun.y=mean, geom="point", color="red") +
  theme(axis.text.x = element_blank()) +
  scale_y_continuous(name="Median proportion of the area of each proxy conserved by sp")

# Median and mean together

filter(sols_summary_spp, Solution!="ENM_sp") %>%
  gather(., SummaryStat, value, -Solution, -c(Richness:Prop_to_AreaSP), -Dist.to.Optimun, -sp) %>%
  ggplot(., aes(x=interaction(SummaryStat, Solution), y=value, color=SummaryStat)) + geom_violin() + geom_jitter(size = 0.1) +
  theme(axis.text.x = element_text(angle = 45, hjust = 1))

# Proportion of the distribution of the sp conserved vs MEAN proportion of each proxy conserved by sp

filter(sols_summary_spp, Solution!="ENM_sp") %>%
  ggplot(., aes(x=Prop_to_AreaSP, y=mean.prop, color=Solution)) + geom_point() +
  scale_x_continuous(name="Proportion of distribution of the sp conserved") +
  scale_y_continuous(name="Mean proportion of the area of each proxy conserved by sp")

# Proportion of the distribution of the sp conserved vs MEADIAN proportion of each proxy conserved by sp

filter(sols_summary_spp, Solution!="ENM_sp") %>%
  ggplot(., aes(x=Prop_to_AreaSP, y=median.prop, color=Solution)) + geom_point() +
  scale_x_continuous(name="Proportion of distribution of the sp conserved") +
  scale_y_continuous(name="Median proportion of the area of each proxy conserved by sp")

## with regression lines

filter(sols_summary_spp, Solution!="ENM_sp") %>%
  ggplot(., aes(x=Prop_to_AreaSP, y=mean.prop, color=Solution)) + geom_point(size=0.7) +
  scale_x_continuous(name="Proportion of distribution of the sp conserved") +
  scale_y_continuous(name="Mean proportion of the area of each proxy conserved by sp") + geom_smooth(method=loess, aes(fill=Solution))